Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  233 bits (594), Expect = 2e-65
 Identities = 162/458 (35%), Positives = 240/458 (52%), Gaps = 21/458 (4%)

Query: 101 RQAMQVAVDSQVNPELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRD---- 156
           R A + A  + ++  LKE          Q+ +++    LQ       T A   YR+    
Sbjct: 200 RDADESAAIAAIDEALKE--------IGQIAQDQGNESLQGLT--PATAALQSYRERLGE 249

Query: 157 -KYAPTYGEMRKQANQIL-DTLLQQAEQQNHASV--ESFEAGRTKQMVIIAAGLIISFIT 212
            K   T  E  ++  + L +TLL      NH        EA  +  M+   AGL +  I 
Sbjct: 250 FKQIQTKAEADQEIMEGLGETLLDSVGALNHLQTAQRDSEAANSSAMLSSVAGLAL-LIG 308

Query: 213 SLVIITNLRSRVAYLKDRMSSAA--ANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSI 270
            L      R     L+  +S+AA  A   L   + +   DE+  +  S       +   +
Sbjct: 309 LLAAWIMTRQITVPLQQTLSAAARIAQGDLSRDISVTRRDEMGQLQGSMQTMTVSLRELV 368

Query: 271 EEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAA 330
             ++E   ++A+ A  +S     T     SQ+D T QVATA++E+ ATV E+A NA  A+
Sbjct: 369 GGISEGVSQIASAAEQLSAVTKQTCIGVTSQKDETDQVATAMNEMAATVQEVARNAQEAS 428

Query: 331 DVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISE 390
             A QA   +  G +VVG+   +I+ L  E+ N+TQ +S+L  + N I   LD I+S+S+
Sbjct: 429 QAAAQADQQARSGDEVVGQAITQIEQLAREVLNSTQSMSALKQESNKIVGVLDVIKSVSQ 488

Query: 391 QTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVE 450
           QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+  STEEI+++I  LQT + +   
Sbjct: 489 QTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIAALQTGTQQVAT 548

Query: 451 AMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVED 510
            ++  R+ +D  VE S +A  +L +I   +  I   N Q+ATA+EEQS V E INRNV  
Sbjct: 549 TLDSSRTLTDNTVELSRRAGGALEQITRTVATIQHMNEQIATASEEQSVVAEQINRNVIS 608

Query: 511 INQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           +  ++ +T+  +++ + +S  L RL + L  LVG F +
Sbjct: 609 VRDISEQTAAASEQTAASSVELARLGTHLQTLVGKFRV 646