Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  308 bits (788), Expect = 5e-88
 Identities = 168/309 (54%), Positives = 220/309 (71%)

Query: 240 LRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCA 299
           LR RL + G DEL  +   FN+FI K+  S+ EVA+ S++L   A  VS++A  T  +  
Sbjct: 328 LRQRLPVQGEDELAQLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQ 387

Query: 300 SQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVN 359
            Q+DRT+QV TAI+E+GATV+EIA+NAA AA+ AK A   SG G+KVV + ++ I  L  
Sbjct: 388 DQKDRTMQVVTAINEMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSK 447

Query: 360 ELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADE 419
           ++    +V+ SLAT    I S LD IR+ISEQTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 448 DVSQVGEVIESLATHTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADE 507

Query: 420 VRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQ 479
           VR LASR+AAST+E+Q +I++LQ+ES RAV AM + RS+S   V    +A+ +L+ I+ Q
Sbjct: 508 VRNLASRTAASTDEVQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQ 567

Query: 480 IDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQL 539
           I  I+D NIQVA ATEEQSTVVEDINRNV +IN +T  T+  A   +RAS  L  L+++L
Sbjct: 568 IGLISDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDLNALATRL 627

Query: 540 DKLVGSFEL 548
           D+LV  F++
Sbjct: 628 DQLVARFKV 636