Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  228 bits (581), Expect = 5e-64
 Identities = 151/446 (33%), Positives = 229/446 (51%), Gaps = 26/446 (5%)

Query: 110 SQVNPELKEQARKL----QARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEM 165
           S ++P++ ++ R+L    Q  FE +V +E E  L                 K     G +
Sbjct: 194 SDLSPDVADEIRRLMKDYQMNFEALVNKEKEFGL----------------GKEDGKMGAL 237

Query: 166 RK---QANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRS 222
           R    Q+ Q    L + A  + H       A  T    +IA   ++  I + +II  + +
Sbjct: 238 RSVIDQSEQATQELRELALHEIHDEEGDSVAMATTLFAVIA---VLVAIVTFMIIRAIIT 294

Query: 223 RVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELAT 282
            +  +   +S    + +L  R +  G DE+ +IG+ FN  ++     I++V +    +  
Sbjct: 295 PINNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNE 354

Query: 283 MASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGE 342
               +S  A         Q + T  VATAI E+GAT+ EIA N  +AA+ A     ++  
Sbjct: 355 SCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQV 414

Query: 343 GKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIE 402
           G++ V +   +IQ+L  +L+N+  VV+ L      I S LD IR I+EQTNLLALNAAIE
Sbjct: 415 GQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIE 474

Query: 403 AARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVV 462
           AARAGEQGRGFAVVADEVR+LA R+  STEEI  +I  LQ+ +   V+ ME  + Q    
Sbjct: 475 AARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGES 534

Query: 463 VEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVA 522
            E +A A   L +IN  +  I D + Q+A A EEQS+V  ++N+NV  I  +  E+SH A
Sbjct: 535 AEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAA 594

Query: 523 DELSRASASLQRLSSQLDKLVGSFEL 548
              ++AS  ++  +  L + V  F +
Sbjct: 595 MANAKASDDVRERAEYLQRAVSQFRV 620