Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (556), Expect = 4e-61
 Identities = 126/332 (37%), Positives = 189/332 (56%), Gaps = 2/332 (0%)

Query: 217 ITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAEN 276
           +T    R       ++   ANL+LR  LE  G DEL  +   FNAF+ ++   +  V ++
Sbjct: 225 VTEPLQRTLMAFKNIAEGEANLTLR--LEERGRDELSQVSVYFNAFVGRIQSLVISVRDS 282

Query: 277 SKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQA 336
                 ++SS+S  AH       S +  T  VA AI+++ AT SE+A+NA +AA  AK A
Sbjct: 283 VDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNA 342

Query: 337 TLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLA 396
              +     VV      ++ L +EL+  +++  +L      I   LD I  I+EQTNLLA
Sbjct: 343 DSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLA 402

Query: 397 LNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGR 456
           LNAAIEAARAGE GRGFAVVADEVRTLASR+  ST+EI  +I  ++    +   ++ + R
Sbjct: 403 LNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARAR 462

Query: 457 SQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTT 516
            QSD  V+ +A+   +L  I   I QIND N+Q+ATAT+EQS V+ ++N N+  IN+++ 
Sbjct: 463 QQSDNTVDETAQVMDALGLIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISV 522

Query: 517 ETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           E    ++ +   S  +   S Q+ +L+  F++
Sbjct: 523 ENLSKSETVGHTSDRIAEDSRQMAQLIAVFKV 554