Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  232 bits (591), Expect = 3e-65
 Identities = 142/372 (38%), Positives = 211/372 (56%), Gaps = 9/372 (2%)

Query: 186 ASVESFEAGRTKQM-----VIIAAGLIISFITSLVIITNLRSRVAYLKDRMSS----AAA 236
           A VES+    TK M     +I+   L++  IT++V++   +  V  + + + +    A  
Sbjct: 183 AQVESYREVMTKHMNDKAMMILLFALVLVAITAVVMLVAAQRMVNPIHNMVQNLEDIAKG 242

Query: 237 NLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQS 296
              L  RL++ G+DE+  +G++FN F+DK+   I++VA  + E+ + A ++S +      
Sbjct: 243 EGDLTKRLDVQGSDEIAMLGRAFNQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQ 302

Query: 297 NCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQT 356
              S  + T QV TAI E+ AT SE+A +    A+  + AT   G  ++ V    + + T
Sbjct: 303 QLISHNNETDQVVTAITEMSATASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVST 362

Query: 357 LVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVV 416
           L+ E+D A   ++SL  Q   I+S L  I  I+EQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 363 LMAEIDMAAGHINSLNEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVV 422

Query: 417 ADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEI 476
           ADEVR+LASR+ AST EI ++++ L    + AV +ME  +      V  S   + SL  +
Sbjct: 423 ADEVRSLASRTQASTLEINEMLSELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAV 482

Query: 477 NSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLS 536
            S +  IND + Q+ATA  EQS+V E+INRNV  I ++  E    ++  S  S  L    
Sbjct: 483 TSAVTSINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANEG 542

Query: 537 SQLDKLVGSFEL 548
             LD LVG F++
Sbjct: 543 RNLDTLVGQFKV 554