Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  306 bits (785), Expect = 1e-87
 Identities = 165/309 (53%), Positives = 222/309 (71%)

Query: 240 LRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCA 299
           LR RL ++GNDEL  + K FN+FI+K+ HSI EV + S +L+  A  V+ +A  TQ +  
Sbjct: 330 LRQRLPVEGNDELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQ 389

Query: 300 SQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVN 359
            Q+D+T+ V TAI+E+GATV EIA NAA AAD AK A   S  G+ VV   ++ I  L  
Sbjct: 390 LQKDQTMMVVTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQ 449

Query: 360 ELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADE 419
           +++    V+ SLAT    I S LD IR++S+QTNLLALNAAIEAARAGE GRGFAVVA+E
Sbjct: 450 DVEQVGNVIESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEE 509

Query: 420 VRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQ 479
           VR LASR+AAST+E+Q++I+ LQ+E+ RAVEAM + +S+S   V+   +A+ +LTEI+ Q
Sbjct: 510 VRNLASRTAASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQ 569

Query: 480 IDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQL 539
           I  I D NIQVA ATEEQSTVVEDINRNV +I+++T  TS  +  +++AS SL +L+ +L
Sbjct: 570 IGAITDMNIQVAAATEEQSTVVEDINRNVTEISEITQRTSETSQAVAQASQSLNQLAHRL 629

Query: 540 DKLVGSFEL 548
           D LV  F++
Sbjct: 630 DTLVAGFKV 638