Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  239 bits (609), Expect = 3e-67
 Identities = 140/355 (39%), Positives = 206/355 (58%), Gaps = 1/355 (0%)

Query: 195 RTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLS-LRTRLELDGNDELC 253
           R K ++I    L+I    +  I  ++   +A   D ++  A     L  R+E+   DE+ 
Sbjct: 280 RLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIEVKSKDEMA 339

Query: 254 DIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIH 313
            + ++FN F +K+H ++ +V++++  LAT A  +S   H TQ     Q   T QVATA++
Sbjct: 340 QLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETEQVATAMN 399

Query: 314 ELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLAT 373
           E+ ATV E+A NA  AAD A  A+  + +GK +V +V + I  L +E+  A   ++ L  
Sbjct: 400 EMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAANAINELER 459

Query: 374 QINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEE 433
               I S L  IR+I++QTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR+ AST E
Sbjct: 460 NTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTTE 519

Query: 434 IQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATA 493
           IQQ+I  LQ  +   V +M    + +   V    +A  +L  I   +  I+  NIQ+A+A
Sbjct: 520 IQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQMNIQIASA 579

Query: 494 TEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
             EQ  V  +IN+NV +IN + T  +  A + +RA   L +LS +L  L+  F++
Sbjct: 580 ANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLLSQFKI 634