Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  233 bits (595), Expect = 1e-65
 Identities = 138/372 (37%), Positives = 215/372 (57%), Gaps = 9/372 (2%)

Query: 186 ASVESFEAGRTKQM-----VIIAAGLIISFITSLVIITNLRSRVAYLKDRMSS----AAA 236
           A VE +    T+QM     +I+   L+++ IT+ +I+      V  +K+   S    A  
Sbjct: 183 AVVEDYRQTVTEQMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKG 242

Query: 237 NLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQS 296
              L  RL + G DE+  +G++FN F+DK+   I +VA  + ++ + A+++  +  +  S
Sbjct: 243 EGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSS 302

Query: 297 NCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQT 356
              S  + T QV TAI E+ +T SE+A N    A+  + AT      ++ V      I  
Sbjct: 303 QLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAG 362

Query: 357 LVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVV 416
           L+++++NA   + SL+ Q   I+S L  I  I+EQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 363 LMSQINNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVV 422

Query: 417 ADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEI 476
           ADEVR LASR+ AST EI ++++ L    + AV+ M++ +      V+ S   ++SL  +
Sbjct: 423 ADEVRNLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSV 482

Query: 477 NSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLS 536
            S +  IND + Q+ATA  EQS+V E+INRNV  I ++  E  H +++ ++ S ++ +  
Sbjct: 483 TSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEG 542

Query: 537 SQLDKLVGSFEL 548
             L KLVG F++
Sbjct: 543 INLGKLVGQFKI 554