Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (271), Expect = 1e-28
 Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 10/188 (5%)

Query: 160 IMYVVVDAIRKLH------TELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVI 213
           ++Y V D     H       +L  LS+   LTG  NR   +  LK      Q    +  +
Sbjct: 130 VIYDVTDVATNRHQLQAANAQLQLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSL 189

Query: 214 AVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTD 273
            ++DIDHFK VND YGH  GDKVI QV  ++  H R+ D++ R GG+EF ++  +T  + 
Sbjct: 190 VMLDIDHFKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSG 249

Query: 274 ATLVMSHIGCRIQQTHYPYH---AKVTVSVGLAEALR-TDDPEQWFKRADQALYHSKKMG 329
           A      +   ++     Y+    + T+S+G+A+  + ++D      RADQALY SKK G
Sbjct: 250 AHAFAERMRHSVEALEVLYNDQTIRFTISLGVADLSQPSNDHADLIARADQALYTSKKTG 309

Query: 330 KNRVSFDE 337
           +NRV+  E
Sbjct: 310 RNRVTVHE 317