Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Synechococcus elongatus PCC 7942

 Score =  108 bits (270), Expect = 6e-28
 Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 15/186 (8%)

Query: 169  RKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLR--HRQLANESAVIAVIDIDHFKSVND 226
            +KL  +L   +T  ALTG LNR Q     +  L   +R   + S  + +IDIDHFK++ND
Sbjct: 855  KKLEQKLQQQATTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLVIIDIDHFKTIND 914

Query: 227  LYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRI- 285
             YGH  GD+V+     I   + RE+D+  RLGGDEF+L+   T+   A  VM  I   + 
Sbjct: 915  SYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQAYQVMDRIRQLVI 974

Query: 286  -QQTHYPYHA-KVTVSVGLA----EALRTDDPEQWFKRADQALYHSKKMGKNRV---SFD 336
             Q  H P  A  +T+SVG+A    E L  D   Q+ +RAD+ALY +K+ G++R+      
Sbjct: 975  QQSLHLPQQAIAITISVGIAVWTPEILTLD---QFLERADRALYQAKQQGRDRIILLDTS 1031

Query: 337  EEHVIE 342
             E +IE
Sbjct: 1032 SEEIIE 1037