Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., diguanylate cyclase (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 20/256 (7%)

Query: 89  VVIVVMAIHIFGTLASYWLFPVLIAIAFLLPQKDNL-------LTITIIIPASIWVLIPH 141
           V I  + + + G LA  WL  +  A  FLL     +       L +   I  + W    +
Sbjct: 308 VYIFTLLMPLLGILA--WLHGLPTARLFLLASLSTMVGSCTTGLAVEGYISFNQWT---Y 362

Query: 142 QTAEVTLRFSLAISACA-AIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKC 200
           + AE+ +     + A A A  +   +  R L  +L   +    LTG  NR      L++ 
Sbjct: 363 RAAEIGMFIDAMLLALALAAQFRQSEQERVLAQQL---AATDPLTGIANRRAFSEQLQR- 418

Query: 201 LRHRQLANESAVIAVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGD 260
           L H         + +IDID FKS+ND  GH+ GDKV+T +  ++    R  D   R GG+
Sbjct: 419 LWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGDKVLTDIARVIRYSIRNRDQCGRWGGE 478

Query: 261 EFLLLFENTSLTDATLVMSHIGCRIQQTHYPYHA---KVTVSVGLAEALRTDDPEQWFKR 317
           EF++L  + S  +A ++   I   I+   +P  A   KVT SVG+         E   +R
Sbjct: 479 EFVVLLASASEEEAGIIAERIRHNIESLSFPAPANKLKVTASVGVCLDEGHSRHEDILRR 538

Query: 318 ADQALYHSKKMGKNRV 333
           AD+A+YH+K  G NRV
Sbjct: 539 ADEAMYHAKDAGGNRV 554