Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (254), Expect = 1e-26
 Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 56/293 (19%)

Query: 46  LLIDYVLLGGLIIVFQCTLLIEITAIYYQKKTPWGFRLPLALVVVIVVMAIHIFGTLASY 105
           LL    +L  L+I+F C  +  +T  Y               V+++    I  F +L   
Sbjct: 43  LLESVPVLFWLVIMFSCHYIRHLTYSY---------------VLLLSGAIISFFASLMD- 86

Query: 106 WLFPVLIAIAFLLPQKDNLLTITIIIPAS-IWVLIPHQTAEVTLRFSLAISACAAIMYVV 164
           WL  + +   F   + D L +I +++ A+ + +L  HQ  + +L   +A +         
Sbjct: 87  WLDEITVPTEFAFVE-DVLQSIGLLLSATGLLLLFHHQLVQQSLLKKIAAT--------- 136

Query: 165 VDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSV 224
                              LTG LNR        +  +  +  + S V A++D+DHFK +
Sbjct: 137 -----------------DPLTGALNR--------RAFKAPKTHSGSTVFALVDVDHFKRI 171

Query: 225 NDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCR 284
           ND YGHD GD V+ ++ ++++ H RE D  FR GG+EFLL F    L  A+  M  +   
Sbjct: 172 NDTYGHDAGDFVLVELAKLISNHIREDDQFFRWGGEEFLLEFRQAELAQASKRMEALRQL 231

Query: 285 IQQTHYPYHAK---VTVSVGL-AEALRTDDPEQWFKRADQALYHSKKMGKNRV 333
           ++ +H+  + +   +T+S GL   +      E+  K AD+ALY +K  G+NR+
Sbjct: 232 VESSHFNLNGQAINITISAGLTCVSPNHGGLEKALKAADEALYRAKDSGRNRI 284