Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 2e-27
 Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 173 TELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFKSVNDLYGHDT 232
           TEL  +S    LTG  NR     F  +  +    +     + VIDIDHFK  ND +GH+ 
Sbjct: 188 TELSVISLTDKLTGLNNRR---AFESRLAQEFLPSTPKCSLLVIDIDHFKQFNDTWGHNA 244

Query: 233 GDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPY 292
           GDKV+  V + +    +  DL+ R GG+EF+++ ++TS  DA  +   +  RI       
Sbjct: 245 GDKVLVYVAQNLKQAVKGEDLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTL 304

Query: 293 H------AKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRV 333
                   KV+VS+G+A+A   + PEQ+F+RAD ALY +K  G+NRV
Sbjct: 305 KKDNLDLGKVSVSIGVAKAYANETPEQFFERADGALYRAKGTGRNRV 351