Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  108 bits (271), Expect = 2e-28
 Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 25/323 (7%)

Query: 34  SSLVFFPLAVKNLLIDY---VLLGGLIIVFQCTL-LIEITAIYYQKKTPWGFRLPLALVV 89
           ++L+F  +A+  L++     V LG   +VF   L LI +T  + ++    G   P+  +V
Sbjct: 11  AALLFHLVAMATLVLYCAYRVSLGHWPMVFIYGLSLIPLTLSFVKELR--GQASPVNRMV 68

Query: 90  VIVVMAIHI------FGTLASYWLFPVLIAIAFLLPQKDNLLTITIIIPASIWVLIPHQT 143
            +++++I I       G     ++FP +    FL   +  L+  +      +      + 
Sbjct: 69  TLLLVSIGIAATCLEIGYAGMIFIFPAIFIYFFLFNIRAALMLSSAFTALCLICGAQVEA 128

Query: 144 AEVTLRFSLAISACAAIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRH 203
            +V  RF++A   C     V    + K H  L  ++ R  LTG  NR +L+  L      
Sbjct: 129 NDVIARFAVASVNCIIFGAVFAFILAKQHDSLVQIAQRDPLTGLFNRSKLELDLAALAPA 188

Query: 204 RQLANESAVIAVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFL 263
            Q     A++ ++D+DHFK +ND++GH  GDKV+T + ++++    ++   +R GG+EFL
Sbjct: 189 TQ-----AILMLLDVDHFKRINDVHGHQMGDKVLTSLGKLLDALLPDVATAYRFGGEEFL 243

Query: 264 LL--------FENTSLTDATLVMSHIGCRIQQTHYPYHAKVTVSVGLAEALRTDDPEQWF 315
           +L        F  T+L  A          ++       + +T S+G+A+ +  +    WF
Sbjct: 244 VLFNLTEPSAFNETALNLAKTTAGRFQAALRCVDVVPGSTITCSIGIAQRIAGEHIPPWF 303

Query: 316 KRADQALYHSKKMGKNRVSFDEE 338
            RAD ALY +K+ G+++V   EE
Sbjct: 304 DRADAALYRAKRSGRDQVCVFEE 326