Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score =  102 bits (254), Expect = 2e-26
 Identities = 84/240 (35%), Positives = 114/240 (47%), Gaps = 14/240 (5%)

Query: 107 LFPVLIAIAFLLPQKDNLL-TITIIIPASIWVLI-----PHQTAEVTLRFSLA--ISACA 158
           LFPVL    F+L Q+  LL +I     A++ V I       Q       F+LA  ++ C 
Sbjct: 120 LFPVLPF--FVLGQRLGLLVSIVFATTATVGVTILAVLDGAQGFSWIAPFNLAGALAGCT 177

Query: 159 AIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDI 218
            + Y       K   +L  L+    LTG  NR  L       +  R  A     + V+D+
Sbjct: 178 VLAYFYEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLDL 237

Query: 219 DHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVM 278
           DHFKS+ND YGH+ GD V+  V  ++    R  DL+ R+GG+EF LL  +T L  A  V 
Sbjct: 238 DHFKSINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVA 297

Query: 279 SHIGCRIQQTHY---PYHAKVTVSVGLAEA-LRTDDPEQWFKRADQALYHSKKMGKNRVS 334
             I   I+ T          VTVS+G+AE   +  D    F  AD  LY +KK G+NRVS
Sbjct: 298 EKIRKAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRVS 357