Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 37/340 (10%)

Query: 21  YYQRRVSLFIGFISSLVFFPLAVKNLLI----DYVLLGGLIIVFQCTLLIEITAIYYQKK 76
           Y++ R+      +SS  F  L + N+      +Y  L     V   ++L           
Sbjct: 19  YWRTRLIGHTLLLSSSFFLVLTLLNIFYFESYEYATLDASGFVLSLSILAFFNRTANVNL 78

Query: 77  TPWGFRLPLALVVVIVVMAIHIFGTLASYWLFPVLIAIAFLLPQKDNLLTITIIIPASIW 136
             W   L +  ++++ V ++  +   + YW   +     FLL ++   L   I      +
Sbjct: 79  ASWAVTLMVTGLILLFVASVGGYAH-SLYWATLIPPFAFFLLGRQRGSLVSLIAFGVCAY 137

Query: 137 VLIPHQTAEVTLRFSLAISACAAIMYVVVDAIRKLHTELFYLSTRHA------------- 183
           ++         + F +      A+  V+  +I  +    FY  TR +             
Sbjct: 138 IVYNQIQEARPVTFGMG-----ALFNVIEVSIAHILLFRFYEGTRSSAYRQLGERNAKIQ 192

Query: 184 -------LTGTLNRHQLDGFLKKCL---RHRQLANESAVIAVIDIDHFKSVNDLYGHDTG 233
                  LTG  NR +LD  L++ +   RHRQ       + ++D+D+FK +ND +GH TG
Sbjct: 193 KLAETDKLTGLYNREKLDITLEEYVLQSRHRQTPFS---LLILDVDYFKQINDAHGHLTG 249

Query: 234 DKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYH 293
           D+V+ Q+ + + + CRE D L R GG+EF++L   T L+    V   +   I    +   
Sbjct: 250 DRVLVQLADSLRSLCREGDFLARWGGEEFVILLPETQLSICVAVAEQLRQDIAAQKFDGQ 309

Query: 294 AKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRV 333
           + +T+S+G A+    D  +    RAD ALY +K  G+NRV
Sbjct: 310 S-LTISLGAAQLREDDTTKTLVNRADNALYQAKHTGRNRV 348