Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (275), Expect = 8e-29
 Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 3/190 (1%)

Query: 151 SLAISACAAIMYVVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANES 210
           +L++     I+++    + +   +L  +++   LTG  NR   + +  + L   +L+  S
Sbjct: 296 ALSLVVTIGILFISNMTLGRYQRKLEIMASTDKLTGAANRQVFEEYFHQALDKAKLSQTS 355

Query: 211 AVIAVIDIDHFKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTS 270
             I +IDIDHFK VND YGH  GD V+  V  ++ +  +  D+L R GG+EFL+L     
Sbjct: 356 ISILLIDIDHFKKVNDSYGHSVGDLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMD 415

Query: 271 LTDATLVMSHIGCRIQQTHYP---YHAKVTVSVGLAEALRTDDPEQWFKRADQALYHSKK 327
           L+ A  +       I Q        H  +TVS+G+AE  + +  E   KRAD ALY +K+
Sbjct: 416 LSRAAELAERFRDSISQRELKVNGVHIAITVSIGVAEYQKLEPAEDLIKRADLALYQAKE 475

Query: 328 MGKNRVSFDE 337
            G+N+V  ++
Sbjct: 476 AGRNQVVLNQ 485