Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.8 bits (242), Expect = 4e-25
 Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 24/273 (8%)

Query: 83  LPLALVVVIV---VMAIHIFGTLASYWLFPVLIAIAFLLPQKDNLLTITIIIPASIWVLI 139
           L LAL ++ V   +MA      +   W+F +   + F    +   + + +++   I +L 
Sbjct: 83  LLLALALIGVDWWLMATGGVAGMGHLWVFSLPPLLLFTFGLRRGGMLVALLVFGIICILY 142

Query: 140 -PHQTAEVTLRFSLA----ISACAAIMYVVVDAIRKLHTELFYLSTRHAL---------T 185
            P + +      S A    ++  A+I  V V    + H+E   L+  H L         T
Sbjct: 143 GPEELSPFEYGDSFAPRYLLALTASISLVSVAEAARRHSERRLLALTHQLAFCARSDPLT 202

Query: 186 GTLNRHQL-DGFLKKCLRHRQLANESAVIAVI-DIDHFKSVNDLYGHDTGDKVITQVVEI 243
           G  NR  L + F ++  R R L N + +  ++ DIDHFK++ND +GH+ GD V+ ++ ++
Sbjct: 203 GLANRRSLCERFEQE--RQRSLRNNTPLSLILCDIDHFKTINDTHGHECGDYVLRKLADM 260

Query: 244 MNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIGCRIQQTHYPYHA---KVTVSV 300
           + T+ R  D + R GG+EFLLL  +T    AT +   +    +   + YH    +VT+  
Sbjct: 261 LRTNMRAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTLTESYPFSYHGIPIRVTLCF 320

Query: 301 GLAEALRTDDPEQWFKRADQALYHSKKMGKNRV 333
           G+ +  R    +   ++AD+ LY +K+ G+NRV
Sbjct: 321 GVHQCSREGHTDYHIRKADRKLYMAKEQGRNRV 353