Pairwise Alignments

Query, 359 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  109 bits (272), Expect = 1e-28
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 1/172 (0%)

Query: 163 VVVDAIRKLHTELFYLSTRHALTGTLNRHQLDGFLKKCLRHRQLANESAVIAVIDIDHFK 222
           + +  ++K+  +L   S   ALTG  NR   D   +      Q   +S V+A+IDIDHFK
Sbjct: 150 IAILELKKVGEQLHNTSMTDALTGVNNRRAFDLKFEAEFARWQRTGQSFVLALIDIDHFK 209

Query: 223 SVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSHIG 282
           S ND YGH  GD+ ++QV  +   H R  D   R GG+EF+L+   T    A   +  + 
Sbjct: 210 SFNDSYGHAAGDEALSQVAALFQRHSRNYDFFARYGGEEFVLILPGTDTASANKTLEKLR 269

Query: 283 CRIQQTHYPYHAKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRVS 334
             +   H     ++TVS+GLA A   DD +Q  + ADQ LY +K  G+N+ S
Sbjct: 270 L-VVANHEWLLRQLTVSIGLASADLFDDKKQLLEVADQMLYKAKTQGRNQTS 320