Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  147 bits (372), Expect = 4e-40
 Identities = 104/379 (27%), Positives = 186/379 (49%), Gaps = 11/379 (2%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           K+   +A LAA+   +  + +P+   + ++  V+   L   ++ + I + L Q V G L+
Sbjct: 24  KVVALLAGLAAISMLSTNIILPAFAEIGKDLGVTARELGLTLSSFFITFALGQLVVGPLA 83

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEG 141
           DR GR+ +++ GL+++++G++IA  A      + G  VQ LG+     +SR ++RD FEG
Sbjct: 84  DRYGRQKLVLGGLSVFVVGTVIAGLATTLDVLIAGRVVQALGVCAASVLSRAIARDLFEG 143

Query: 142 AELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETL 201
             L +  SL  +    +P  +P+ G  L+ + GWR+ ++ + L A+ +    +  + ET 
Sbjct: 144 ETLARALSLTMIATAAAPGFSPLAGSVLSVTLGWRAIFILVGLAAVVLAFFYVRDLGETH 203

Query: 202 PATAR---KKEPVLRSYHYVLSDRRFQGYLICLVATFAGL-AVFEAAAGVLLGGVLGLPA 257
           PA  R     + V+ +Y  +  D+RF    + +    +GL A F AA  +L+ G+ GL +
Sbjct: 204 PADRRAPHSAKSVVLAYGRLALDKRFILPALSMSLLMSGLFASFAAAPAILMQGI-GLTS 262

Query: 258 TTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGL-LAILTGSLVIMLPGLLGM-TT 315
               L F   +    A    +  +A     + A  VG+  A+  G L+++ P   G+   
Sbjct: 263 LQTGLYFAATVFVVFAAGMAAPRLAHRHGARIATLVGIACAMAGGGLLLVGPAAPGLGWY 322

Query: 316 ALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFP 375
           ALS+I     +  G G+  P  T   + PF   AG   A+LG +    A L+T  A++  
Sbjct: 323 ALSMI----TFLWGMGLANPLGTAITMGPFGKEAGMASALLGFLSMGAAALSTWLASVLS 378

Query: 376 ASDQLPLGIIMLLMSVLAL 394
            +    LG I  +  ++AL
Sbjct: 379 FAPVTTLGGIQTMACLVAL 397