Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., MFS transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  125 bits (313), Expect = 3e-33
 Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 6/372 (1%)

Query: 27  IAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGR 86
           +  L+A G      Y+P+   MA  F      +Q  +A Y +   + Q  YG ++DR GR
Sbjct: 9   LGALSAFGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADRFGR 68

Query: 87  KPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFEGAELH 145
           +  ++ G+ ++ + SL   +A    W +   FVQ LG GC G  +SR +  D  +     
Sbjct: 69  RIPLLTGVGLFTLASLACAYAPNLEWLIGARFVQALG-GCAGMVISRAVVSDKCDAVGSA 127

Query: 146 KVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATA 205
           KV S + + +  +P++AP+LGG L    GW+S ++ L++F+      +   + E+LP   
Sbjct: 128 KVFSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTVFSALASTAVALWLPESLPDHV 187

Query: 206 RKK--EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLL 263
            ++     LR Y  +L+D  + G+ +      AG+  + A +  +   + G+PA     L
Sbjct: 188 PRQPLSGALRQYGRLLTDSVYLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHFGWL 247

Query: 264 FVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGA 323
           F     G++  A ++  +         +   +   L   L ++    L       L+   
Sbjct: 248 FGTNAAGFILVAQVNARLLSKRGPAFLLSRAVWVYLGAGLSLLAVSSLQPAQLWPLLVPL 307

Query: 324 TIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQ-NLGAGLATLFAAMFPASDQLPL 382
            I     G + P A+  A++     AG+  A+LG +Q ++ AG A L AA+   +  +P+
Sbjct: 308 FICIASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAAALVAALHNGT-AVPM 366

Query: 383 GIIMLLMSVLAL 394
            +++ L  +L +
Sbjct: 367 ALVISLCGLLVV 378