Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N1B4

 Score =  127 bits (320), Expect = 5e-34
 Identities = 93/372 (25%), Positives = 173/372 (46%), Gaps = 6/372 (1%)

Query: 27  IAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGR 86
           +  L+A G      Y+P+   MA  F      +Q  +A Y +   + Q  YG ++DR GR
Sbjct: 9   LGALSAFGPLAIDFYLPAFPAMALAFGTDEKHVQLTLAAYFLGLSIGQLAYGPVADRFGR 68

Query: 87  KPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFEGAELH 145
           +  ++ G+ ++   SL   +A    W +   FVQ LG GC G  ++R +  D  +     
Sbjct: 69  RIPLLTGVGLFTAASLACAYAPTLEWLIGARFVQALG-GCAGMVIARAVVSDKCDAVGSA 127

Query: 146 KVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATA 205
           KV S + + +  +P++AP+LGG L  + GW+S +L L+ F+    + +   + E+LPA  
Sbjct: 128 KVFSQLMLVMGLAPILAPMLGGLLVNTTGWQSIFLALTGFSALAGLAVALGLPESLPAHV 187

Query: 206 RKK--EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLL 263
            ++     LR Y  +L+D  F G+ +      AG+  + A +  +   + G+PA     L
Sbjct: 188 PRQPLSGALRQYGRLLADPIFLGHALTGGVAIAGMFAYIAGSPFVFIKLYGVPAEHFGWL 247

Query: 264 FVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGA 323
           F +   G++  A ++  +         +   +   L+G L ++    L       L+   
Sbjct: 248 FGINAAGFILVAQVNARMLAKRGPAFLLARTVWFYLSGGLALLAVSALHTEQLWPLLIPL 307

Query: 324 TIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQ-NLGAGLATLFAAMFPASDQLPL 382
            +     G + P A+  A++     AG+  A+LG +Q ++ AG A L   +   S  +P+
Sbjct: 308 FLCIASLGCIVPNASACAMNGQGARAGSASAMLGCLQFSVAAGAAALVGVLHDGS-AMPM 366

Query: 383 GIIMLLMSVLAL 394
            +++ L  +L +
Sbjct: 367 AMVISLCGILVV 378