Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., drug resistance transporter, Bcr/CflA subfamily from Pseudomonas stutzeri RCH2

 Score =  139 bits (349), Expect = 2e-37
 Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 26/386 (6%)

Query: 22  KLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLS 81
           ++   +  L+A G     MY+P+   +AQ F  S   +Q  +A Y I   + Q VYG L+
Sbjct: 4   RILLILGALSAFGPLAIDMYLPAFPLLAQSFGTSVDHVQLSLAAYFIGLAIGQLVYGPLA 63

Query: 82  DRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFE 140
           DR GR+  ++ G+ ++ + SL + FA    W +   FVQ LG GC G  ++R + RD  +
Sbjct: 64  DRYGRRGPLLIGVTLFTLASLASAFAPSMDWLIGVRFVQALG-GCAGMVVARAVVRDLCD 122

Query: 141 GAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVET 200
                KV S + + +  +P++APV GG L  SFGW S ++ L+LF+   ++ +   + ET
Sbjct: 123 PMTSAKVFSQLMLVMGLAPILAPVAGGALLASFGWPSIFILLTLFSAMCLVAVTLWLPET 182

Query: 201 LPATARKK--EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPAT 258
            PA   ++     L  Y  +  DR F G+++      AG+  +   +  +   + G+   
Sbjct: 183 YPAGLPRQPMSGALGQYLRLFRDRFFIGHVLTGALCMAGMFAYITGSPFVFIELYGVKPE 242

Query: 259 TVSLLFVLPIPGYLAGAWLSNVIARHWREKT-----------AMHVGLLAILTGSLVIML 307
               LF +   G++  A + NV    WR                 + LLA+       + 
Sbjct: 243 HFGWLFGINAAGFILMAQV-NVRLVRWRGPEFWVRRWVWFFFGSALALLAVAAAQPESLW 301

Query: 308 PGLLGMTTALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLA 367
           P L+ +   +S +          G L P AT  A++    +AG+  A+LG MQ   A +A
Sbjct: 302 PLLIPLFCCVSCL----------GCLLPNATACAMADQRANAGSASALLGSMQFTIAAIA 351

Query: 368 TLFAAMFPASDQLPLGIIMLLMSVLA 393
                       +PL  I+ L  +LA
Sbjct: 352 ASAVGALHNGTAVPLAAIISLCGLLA 377