Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Drug resistance transporter Bcr/CflA subfamily from Pseudomonas syringae pv. syringae B728a

 Score =  139 bits (351), Expect = 1e-37
 Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 4/368 (1%)

Query: 30  LAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKPI 89
           L+A G      Y+P    MA  F      +Q  +A Y +   L Q  YG ++DR GR+  
Sbjct: 12  LSAFGPLAIDFYLPGFPAMASYFGTDEKHVQLTLAAYFLGLSLGQLAYGPVADRFGRRIP 71

Query: 90  IIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGG-AMSRTLSRDCFEGAELHKVN 148
           ++ G+ ++++ S+   FA    W +   FVQ LG GC G  +SR +  D     E  KV 
Sbjct: 72  LLVGVTLFMLASVACAFAPSLEWLIAARFVQALG-GCAGMVLSRAIVSDKCNAVESAKVF 130

Query: 149 SLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARKK 208
           S + + +  +P++AP+LGG L  +FGW+S ++ L+LF+ A +  +   + E++PAT  ++
Sbjct: 131 SQLMLVMGLAPILAPMLGGVLVSTFGWQSIFVSLALFSGACLAAVALGLPESMPATTPRQ 190

Query: 209 --EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFVL 266
                L  Y  +  D  F G+ +      AG+  + A +  +   + G+PA     LF +
Sbjct: 191 PLSGALGQYLNLFKDGVFIGHALTGGIAMAGMFAYVAGSPFVFIKLYGVPAEHYGWLFGM 250

Query: 267 PIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGATIY 326
              G++  A ++  I R       +   +   L   LV++    L       L+    I 
Sbjct: 251 NAAGFILVAQINARILRKTGPAFLLSRTVWIYLAAGLVLLAISGLRTEALWPLLVPLFIC 310

Query: 327 FLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGIIM 386
               G + P A+  A++     AG+  A+LG +Q   A +A     +       P+ +++
Sbjct: 311 VASLGCIIPNASACAMNGQWARAGSASALLGCLQFSVAAVAASLVGVLHDGTATPMALVI 370

Query: 387 LLMSVLAL 394
            L  VL +
Sbjct: 371 SLCGVLTV 378