Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  126 bits (316), Expect = 1e-33
 Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 20/396 (5%)

Query: 12  ITMSASLSVAKLTFFIAILA---AVGQATQTMYVPSIGYMAQEFLVSPAA-LQAVMACYL 67
           I  +A++S      FIA++A   ++   +  + +P +  +     V+     Q V+  YL
Sbjct: 5   IDQAATISGLTKVQFIALMAMLMSINAISIDIMLPGLQEIGASLGVADENHRQYVITAYL 64

Query: 68  IPYGLSQFVYGTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCG 127
           +  G +Q  +G LSDR GR+  ++ GLA+Y + +L  +F   +   L    VQG+G    
Sbjct: 65  LGMGFAQLFFGPLSDRFGRRAPLLGGLALYGVSALAIVFVPTFGALLFLRLVQGIGAAAT 124

Query: 128 GAMSRTLSRDCFEGAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAI 187
             ++ ++ RD + G ++ ++ SL+ M  +  P++AP +G  +     W   ++ ++LFA+
Sbjct: 125 RVITVSIVRDVYGGRQMAEIMSLVMMVFMIVPVIAPSIGQLIMLFSEWHMIFVVIALFAV 184

Query: 188 AVVITMMTSMVETL-PATAR--KKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAA 244
           AV + +   + ETL PA  R      +L  +  VL++R    Y +   A    L  F  +
Sbjct: 185 AVALPVALRLRETLAPANRRPFTASSILAGFRIVLTNRLALFYTLATSALLGALFGFINS 244

Query: 245 AGVLLGGVLGL----PATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILT 300
           A  +L GV GL    PA   +   ++ +      ++ ++ + R +  +   H  LL    
Sbjct: 245 AQQILVGVYGLGVWFPAVFAAFAGMMAV-----ASFTNSRLVRTFGMRALSHAALLGFTL 299

Query: 301 GSLVIMLPGLLG--MTTALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGG 358
            S + M   L+G        L+  AT++    G++       A+ P  + AGT  ++LG 
Sbjct: 300 ASFIWMSASLIGPLPLPLFMLLHAATMFQF--GLIAANFNAMAMEPLGHVAGTASSVLGF 357

Query: 359 MQNLGAGLATLFAAMFPASDQLPLGIIMLLMSVLAL 394
            Q +G G+   F      +   PL +    ++V+AL
Sbjct: 358 TQTIGGGIIGAFIGQAFNNSVTPLAVGFFTVAVVAL 393