Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  107 bits (267), Expect = 7e-28
 Identities = 91/380 (23%), Positives = 166/380 (43%), Gaps = 21/380 (5%)

Query: 27  IAIL-AAVGQATQTMY--VPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDR 83
           IA++ A++  A  +M   +PSIG      + +    Q V+  + + +GLSQ  +G+LSD 
Sbjct: 10  IAVMTASIALAIDSMLPALPSIGQTLD--VANANDTQLVIGVFFLGFGLSQIFFGSLSDA 67

Query: 84  IGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAE 143
            GR+ +++ GLA++ +    A +       L+  F+QG+G       +  + RDCF G +
Sbjct: 68  FGRRSVLLGGLALFSLSMFAASWVESIETLLLLRFIQGIGGAAVRITTMAIVRDCFGGRD 127

Query: 144 LHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPA 203
           + +V S + +  +  P+VAP LG  +     W   ++ + +   A+ +  +T M E+LP 
Sbjct: 128 MARVMSYVMIVFMIVPIVAPTLGQVVIAYADWHWIFILIGVVGAALFVWALTRMKESLPK 187

Query: 204 TAR---KKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTV 260
             R       VL  +  VL++R   GY+I +    A +  +  +   + G V  L +  +
Sbjct: 188 EERLPLSVGAVLSGFRTVLTNRITCGYMIGMTLFTAVICAYVVSVQQVFGEVYNL-SDWM 246

Query: 261 SLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGS---LVIMLPGLLGMTTAL 317
            + F     G     + +    R +  +   H  ++     +    V+ L G      + 
Sbjct: 247 PIAFAGTAGGIAVANFANGYFVRSFGMRRISHAAMILFTLFAAIGYVLSLAGTPAFAISY 306

Query: 318 SLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPAS 377
            L     ++F    ++    T  +L P  + AGT  A+ G +   G  L      +  A 
Sbjct: 307 LLFSLLLMFF---AVIATNFTAISLEPMGHLAGTATAVTGFVSTTGGAL------IGGAV 357

Query: 378 DQLPLGIIMLLMSVLALWGL 397
            QL  G +  L    AL+GL
Sbjct: 358 GQLFDGTLQPLFGGYALFGL 377