Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., drug resistance transporter, Bcr/CflA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (389), Expect = 5e-42
 Identities = 104/377 (27%), Positives = 185/377 (49%), Gaps = 9/377 (2%)

Query: 40  MYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKPIIIAGLAIYII 99
           +Y+PS+  MA +F V    +Q+ +  +L   G+ Q + G L+DR GR+P+ + G  +Y+I
Sbjct: 22  IYLPSMPAMALDFSVDERQVQSTLVLFLFAMGVGQVLIGPLADRYGRRPVALFGTVLYVI 81

Query: 100 GSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVNSLISMCLIFSP 159
            SL+A+ A ++    +   +QGL       ++ +  RD +  A+  ++ S ++  +   P
Sbjct: 82  SSLLAMAALEFELLQLARLLQGLAACSTSIVAFSAVRDSYSSADSARIYSYLNGAICVIP 141

Query: 160 LVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARKKEPVLR--SYHY 217
            +AP LGG L   FGWRS++ F++ + + +++ +   + ET PA      P+ R   Y  
Sbjct: 142 ALAPTLGGLLAIQFGWRSTFAFMAFYGLVMLLVVGYRLPETRPAHTESAGPLYRWGRYAP 201

Query: 218 VLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFVLPIPGYLAGAWL 277
           VL +  F  Y +  +A  A +  + + + + L G LG+     S LF L     +   + 
Sbjct: 202 VLKNSHFMFYAVTCMAAMAAILCYVSYSSIWLIGKLGVSELAFSGLFGLNAVVNVVACFA 261

Query: 278 SNVIARHWREKTAMHVGLLAILTGS---LVIMLPGLLG-MTTALSLIGGATIYFLGAGIL 333
           + V+ R    +  + V L  ++  S   LV+ LP     M  + + +    +  +G   L
Sbjct: 262 APVVIRKLGNRPTVLVALGLMILASVLELVLQLPAWASPMAASFAFMLPMMLLCVGFAFL 321

Query: 334 FPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGIIM--LLMSV 391
              AT+ AL+PF   AGT  A+LG +Q  GA + T    + P +    +G  M  L + +
Sbjct: 322 LGPATSMALAPFGERAGTATALLGFIQMSGASVITALVQLTPMTAPYAIGYTMGGLALVL 381

Query: 392 LALWGLKRV-YTKQPPS 407
           LA+  + R  +  Q PS
Sbjct: 382 LAIMLMPRFGHWHQEPS 398