Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (292), Expect = 9e-31
 Identities = 89/378 (23%), Positives = 167/378 (44%), Gaps = 20/378 (5%)

Query: 26  FIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIG 85
           ++A+L+ +G     MY+P+   +      S + +   + C+L    + Q  YG+L D+ G
Sbjct: 17  YLALLSMLGFLATDMYLPAFNQIESSLNTSASLVAMTLTCFLGGLAIGQLAYGSLCDKFG 76

Query: 86  RKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELH 145
           ++  ++AGL ++ + S++  F    S F +   +Q  G      + + L  + F+  E  
Sbjct: 77  KRNTLMAGLGVFAVSSILLGFTENISVFFVLRVIQAFGACSAAVIWQALVMEKFDEGEAR 136

Query: 146 KVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATA 205
           KV S I   +  SP +AP++G +++E FGWR+ ++ L++  + +++  MT  +     T 
Sbjct: 137 KVFSSIMPLVALSPALAPLMGAWVSEQFGWRAIFIILAI--VGLLLAAMTPALAKESRTR 194

Query: 206 RKKEPVLRSYHYVLSDRRFQG----YLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVS 261
            + EP+L     +L +R FQ     +  C  A F  L ++ A          G  A  + 
Sbjct: 195 SQSEPIL--VKNILKNRAFQNNVAIFGACSAAFFCYLTLWPAVM-----QHHGYAAAEIG 247

Query: 262 LLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIG 321
           L F+     ++ G +           +   ++ +   +  SLV+ L   LG      L  
Sbjct: 248 LSFIPQTLAFMLGGFACKKALHSHSPEAIKNMLITGFVVLSLVLFLLTQLGAGILAVLWV 307

Query: 322 GATIYFLGAGILFPAATTGALSPFPYH----AGTGGAILGGMQNLGAGLATLFAAMFPAS 377
            A +  +  G ++P   T AL+PF  +    AG    +  GM  + +    L A  F  +
Sbjct: 308 FAALAAIN-GAVYPLLVTDALAPFSNNATKAAGWQNFLQLGMAFIASAAVALIAHWFEKA 366

Query: 378 DQLPLGIIMLLMSVLALW 395
             +  GI++    VL  W
Sbjct: 367 --IGTGILVCAAIVLVAW 382