Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., Drug resistance transporter Bcr/CflA subfamily (NCBI) from Rhodospirillum rubrum S1H

 Score =  109 bits (273), Expect = 1e-28
 Identities = 91/346 (26%), Positives = 147/346 (42%), Gaps = 32/346 (9%)

Query: 29  ILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKP 88
           ++A    +   M V      +  FL      Q V+  YL+ + + Q V+G LSDRIGRKP
Sbjct: 26  LMALTALSIDVMLVALADISSDYFLADANDRQLVITAYLLGFAVGQPVWGPLSDRIGRKP 85

Query: 89  IIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVN 148
           ++IAGL IY +G L A+ +  +   L    VQGLG      M+  + RD + G+ + +V 
Sbjct: 86  VLIAGLVIYGLGCLGAMVSPSFETLLAARLVQGLGGASPRVMTMAVVRDRYAGSGMARVM 145

Query: 149 SLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARKK 208
           SL+ M  I  P++AP +G  +     W   + F+ +F + V++  +T + ET     R+ 
Sbjct: 146 SLLMMIFIIVPILAPTMGSAVMAFAPWHWLFGFMMVFDLIVLVWTLTRLRET-HRPQRQL 204

Query: 209 EP----VLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATT----- 259
            P    +L +   V+S+R+  GY +              A G ++G ++G   T      
Sbjct: 205 APSLGGLLETLRVVVSNRQTVGYTV--------------AFGFMMGSLMGYVGTAQQVFV 250

Query: 260 -----VSLLFVL--PIPGYLAGAWLSNV-IARHWREKTAMHVGLLAILTGSLVIMLPGLL 311
                V L  +L   I   +A A + N         +   H  LL  +   LV    G  
Sbjct: 251 EVYHEVELFPILFGAIASAIAAASIINARFVTRIGSRRMSHAALLGFVAVGLVTAAFGFP 310

Query: 312 GMTTALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILG 357
                   +    I F   G++ P     A+ P    AG   + +G
Sbjct: 311 AKPPLALFMAALGIQFFCFGLIGPNFNAMAMEPMGRVAGAASSFVG 356