Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  118 bits (296), Expect = 3e-31
 Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 15/372 (4%)

Query: 29  ILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKP 88
           +LA++G     +Y+P+I  + Q F VS   +Q  +  Y+   GL Q ++G LSD IGR+ 
Sbjct: 29  LLASLGM---DLYLPAINDIRQSFSVSQGQMQLTLTLYMAILGLGQLLFGPLSDAIGRRR 85

Query: 89  IIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKV- 147
           ++IAG  +Y   SL       +S FL+   VQ L        +    RD F   E   V 
Sbjct: 86  VVIAGALVYAGSSLAMALTDSFSVFLLLRIVQALSASAVLVAAFATVRDVFADREEGVVI 145

Query: 148 NSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARK 207
            +++   L   P+VAP +G  +   + WR  +  L++FA  V +  +    ET PA    
Sbjct: 146 YAIMGSVLAAVPVVAPFIGSLIDGLWHWRGIFYTLAIFAALVGLHALLKWPETRPAQTHP 205

Query: 208 KEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLF-VL 266
            E   R ++ ++  + F GY +          V+ +A+  +L   LGL   T SL F  +
Sbjct: 206 FE-WSRCFN-IIRAKAFLGYTLAYATAMGAFFVYFSASPSILMDKLGLDKVTFSLWFGSV 263

Query: 267 PIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIG-GATI 325
            I   +   ++ +++ R   + T +   +  +L+  L+  L  L G    LSL+G    +
Sbjct: 264 AIVMIITTRFVKHLVKRWGTQGTVLRGLIGMMLSSGLLYGLEWLNG----LSLLGFMLPM 319

Query: 326 YFLGAGILFPAATT--GALSPFPYHAGTGGAILGGMQNLG-AGLATLFAAMFPASDQLPL 382
           YF+G  I    A T  GAL+ F + AG   A+   +++L  + L +L   + P+   L +
Sbjct: 320 YFIGVHIALTCAVTANGALAAFSHSAGLATALYYAIESLFLSALVSLLIWLLPSGTTLVI 379

Query: 383 GIIMLLMSVLAL 394
              +L+ + L+L
Sbjct: 380 CSYILISASLSL 391