Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella sp. ANA-3

 Score =  123 bits (308), Expect = 1e-32
 Identities = 92/378 (24%), Positives = 174/378 (46%), Gaps = 14/378 (3%)

Query: 25  FFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRI 84
           F++A+L+ +G     MY+P+   +   F  +P+ +   + C+L    L Q +YG L  ++
Sbjct: 18  FYLALLSMLGFIATDMYLPAFKAIESSFNSTPSQVAMSLTCFLAGLALGQLIYGPLVSKL 77

Query: 85  GRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAEL 144
           G++  +I GL I+ + S+    +       I  F Q +G    G + + +  + ++  + 
Sbjct: 78  GKRYALILGLGIFALASVAIANSDSILMLNIARFFQAVGACSAGVIWQAIVVEQYDAEKA 137

Query: 145 HKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPAT 204
             + S I   +  SP +AP+LG Y+   FGWR+  +F+SL  IA ++ +MT       A 
Sbjct: 138 QGIFSNIMPLVALSPALAPILGAYILNDFGWRA--IFISLCVIAFLLVLMTLYFVPSHAE 195

Query: 205 ARKKEPVLRSYHYVLSDRRFQGYLI----CLVATFAGLAVFEAAAGVLLGGVLGLPATTV 260
            +   P   SY  +L + R+ G ++    C  A FA L V+      ++    G  AT +
Sbjct: 196 HQDTRPSAVSYGQILKNTRYLGNVVIFGACSGAFFAYLTVWP-----IVMEQHGYQATEI 250

Query: 261 SLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAI--LTGSLVIMLPGLLGMTTALS 318
            L F+     ++ G + S ++ +       ++V LLAI  L    ++    L+   T   
Sbjct: 251 GLSFIPQTIMFIVGGYASKLLIKRIGADRTLNV-LLAIFGLCVISIVFFTLLMKAETIFP 309

Query: 319 LIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASD 378
           L+   +I     G ++P     AL  F  +A     +   +Q   A  A+   A++ +S 
Sbjct: 310 LLISFSILAAANGAIYPIVVNSALQQFTQNAAKAAGLQNFLQITIAFGASSLVALWASSG 369

Query: 379 QLPLGIIMLLMSVLALWG 396
           ++ +G  +L  S++ + G
Sbjct: 370 EVAIGWGILSCSLVVILG 387