Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., multidrug resistance protein D (RefSeq) from Shewanella sp. ANA-3

 Score =  306 bits (785), Expect = 6e-88
 Identities = 161/382 (42%), Positives = 238/382 (62%), Gaps = 3/382 (0%)

Query: 16  ASLSVAKLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQF 75
           A+ S  +L F +  + A GQ  QT++VP++  +AQ   V  + LQAVMACYL+ YGL QF
Sbjct: 18  AAGSATQLLFMLVFMVACGQMAQTIFVPALPLIAQGLAVDASKLQAVMACYLLAYGLCQF 77

Query: 76  VYGTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLS 135
           +YG LSDR+GRK  ++ G+ I+I+G+L+A  A  ++  +  S +QGLG    GA+ R++ 
Sbjct: 78  IYGPLSDRVGRKMPLLIGIGIFILGALMAAEATSFNQLIFASLLQGLGTASAGALCRSIP 137

Query: 136 RDCFEGAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMT 195
           RD + G  L + NS +SM ++F PLVAP LG + +  +G ++ Y  L  F   V + +  
Sbjct: 138 RDHYFGDNLVRFNSYVSMAVVFLPLVAPFLGSFASAYWGVQAVYWVLFGFGSLVWLLLCF 197

Query: 196 SMVETLPATARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGL 255
              E+LP   R+++P+L SY +VL  R F+ YL+ L+ATFAG+A FEA AGVL G  L L
Sbjct: 198 GFKESLPKHKREQQPILASYRHVLRHRSFRAYLLSLIATFAGIAAFEAIAGVLYGQYLQL 257

Query: 256 PATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTT 315
               VS  FV PIPGYL GA ++    R  + +  +  G+  +  G+L +++PG+  +  
Sbjct: 258 SPFMVSCYFVAPIPGYLLGALIA---GRQKQAQRTVLQGVALLGAGALFMLIPGIFQLVV 314

Query: 316 ALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFP 375
             SL+ G+ ++F GAG+LFP  T+ AL PFP  AG  GA+LGG+QN GAGLA L  ++ P
Sbjct: 315 GWSLLIGSILFFSGAGMLFPTLTSAALEPFPRQAGIAGALLGGLQNFGAGLAALTMSLVP 374

Query: 376 ASDQLPLGIIMLLMSVLALWGL 397
              QL +G++  LM +L +  L
Sbjct: 375 MGGQLSIGLLSALMVLLVIVAL 396