Pairwise Alignments

Query, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  111 bits (277), Expect = 4e-29
 Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 11/365 (3%)

Query: 29  ILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKP 88
           +L    Q  +T+Y P++  +A+ F VS  +    ++ Y I + +  F +G L+D IGR+ 
Sbjct: 12  LLMMFPQIMETIYSPALPNIAENFAVSVTSASQTLSVYFIAFAVGVFCWGRLADIIGRRN 71

Query: 89  IIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVN 148
            ++AGL  Y IGS  AL    ++  L    +   G   G  +++T+ RD + G EL KV 
Sbjct: 72  AMLAGLLCYAIGSACALMISDFTLLLFARVLSAFGAAVGSVITQTMMRDSYNGEELAKVF 131

Query: 149 SLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARKK 208
           S++ M L  SP++  +LG  L+  +G++  ++ L + AI ++   + S+ ET P   +K 
Sbjct: 132 SVMGMSLGISPIIGLLLGSILSAYWGYQGVFVALMVSAIVLLFLSVKSLPETKPEHTQKI 191

Query: 209 EPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFVLPI 268
             V  +   +      +  L+         + F  A  +     L   A   S L +L  
Sbjct: 192 AIVELAIKMLTDIGIIKNTLLVASFNLMWFSYFSLAPFMFEARGLSTLAFGASGL-LLGF 250

Query: 269 PGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIML--PGLLGMTTALSLIGGATIY 326
             +L   +   ++ R +     + +  L  L G L I L     +G+     L+    + 
Sbjct: 251 GAFLGSYFNKLLLGRGYSCALLVRLASLMALFGGLGIWLFQSTNIGLNNVYFLL-PMLLI 309

Query: 327 FLGAGILFPAATTGALSPFPYHAGTGGAILG-------GMQNLGAGLATLFAAMFPASDQ 379
            +  GI  P   + AL+ +  +AG+ GA+ G       G+   GAG+ +    +   +  
Sbjct: 310 VIAYGIAIPNILSSALANYRAYAGSAGALFGLFYYILLGLGLGGAGMVSHLGGVITLAAL 369

Query: 380 LPLGI 384
           L +G+
Sbjct: 370 LCVGL 374