Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., Na+/H+ antiporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  291 bits (746), Expect = 3e-83
 Identities = 176/492 (35%), Positives = 282/492 (57%), Gaps = 25/492 (5%)

Query: 16  VIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKISGLFWAEGAANS 75
           +IP +L ++LA+  RR L++LGAG+V GA++LN FSP+++++YL   ++  F+ +     
Sbjct: 9   LIPLILTLVLALLLRRTLIALGAGVVLGALILNDFSPVTSLKYLLNTLTSQFYQQSQWQW 68

Query: 76  DNINMLLFMLLLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGLMVFAFFIDDFFH 135
            ++N+L  MLLLG + SL+  SGA   F  W   +   RR A+     + F  FID  F 
Sbjct: 69  WHLNVLFAMLLLGIMTSLLGRSGAVDEFGHWLSARVHSRRQARMGIIGLGFLVFIDGIFS 128

Query: 136 SLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIALIGGILAAHEMT 195
            L+VG++ RP+  ++ +S A+L+Y++D+TA+P+C + P++SWG Y++AL    LAA    
Sbjct: 129 CLAVGSVGRPIARQYGMSPAQLSYMVDTTASPLCSLVPVASWGPYVMAL----LAAISFL 184

Query: 196 EISAISAFVQMIPMNLYAVFTLLMV-LAVIFLPMDIGPMRQHEAWAREGKLWDESKGRPA 254
            +SA+ AF+ +  +N YAV  L++V L  +F          +  W+       ++  + A
Sbjct: 185 PVSALDAFIAIASVNFYAVSALVLVGLGSLF----------NWGWSEHAV---DATEQAA 231

Query: 255 GLDMEGGETARGTMID---MVLPIAVLTITTLIFMIQTGNAVLAANGEAFSLIGALENTN 311
           G+D    +  R        ++LP+  L +  L F + +G  +    G A  L  A    +
Sbjct: 232 GVDNAHQQAQRPKTPSPWPLMLPLLGLLVGALAFTLASGVTLAKEPGMAAWLAAA----D 287

Query: 312 VAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMPAIIILLFAWTIGGVVRD 371
           V  ++  A+L ++ ++ +++L         +     G+ +M  A+ ILL  W IG +++D
Sbjct: 288 VGAAMRNASLTAVVLAALMALWCGRGLHPLMIDMLVGLRSMALAVGILLLTWMIGALIKD 347

Query: 372 LQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDIAAASDISL 431
           L +   +++L    L   LL A +F L  +MAFATGTSWGTF IM+PL   +A      L
Sbjct: 348 LGSAARISALANDLLSPSLLLAGIFALCAIMAFATGTSWGTFAIMIPLCAQVAQGMAPEL 407

Query: 432 MLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAMGALLGYLA 491
           +LP L+AV+AG+VFGDH SPIS TSILSAT +G+   +HV TQLP+A+ AA+ AL G+  
Sbjct: 408 LLPALAAVMAGSVFGDHCSPISDTSILSATASGAAVHEHVTTQLPFALIAAIAALCGFQL 467

Query: 492 MGLLHSVWAGLA 503
           + L  S W   A
Sbjct: 468 LNLGASWWLAWA 479



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)

Query: 14  YSVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKISGLFWAEGAA 73
           ++++ PL A +       +LL   A ++AG+V  +H SP+S    L         A GAA
Sbjct: 389 FAIMIPLCAQVAQGMAPELLLPALAAVMAGSVFGDHCSPISDTSILSAT------ASGAA 442

Query: 74  NSDNINMLLFMLLLGGLISL 93
             +++   L   L+  + +L
Sbjct: 443 VHEHVTTQLPFALIAAIAAL 462