Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Na+/H+ antiporter family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 317 VYAALCSLAVSIVLSL-RLKLSAQTWLSTAPKGVMAMMPAIIILLFAWT-----IGGVVR 370
           V A L ++ ++++LS  +L  +  T++       +  M  I +L  A+       GGV  
Sbjct: 51  VVAILPAIVLALLLSKQKLNQAIDTFIGGIGHSNIIAMCLIYLLAGAFASVAKATGGVDA 110

Query: 371 DLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDIAAASDIS 430
            +  G+ L       +P +LL    FV++  +A A GTS GT   + P+A  ++  +DIS
Sbjct: 111 TVALGLSL-------IPSDLLLPGFFVIAAFIATAMGTSMGTIAAVAPIALGVSQEADIS 163

Query: 431 LMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAMGALLGYL 490
           L L    A+++GA+FGD+ S IS T+I +    G +  D     L +A+ A++  LL + 
Sbjct: 164 LPL-MAGAIISGALFGDNLSIISDTTIAATRTQGCNMKDKFRENLIFALPASLITLLAFT 222

Query: 491 AMGLLHSVWAGLAASSVWFV 510
             G      A +A  SV FV
Sbjct: 223 LAG---QGEANVAPQSVDFV 239



 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 37/234 (15%)

Query: 5   NLAPYSDSVYSVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKIS 64
           N+AP S     V+P L  + LA+    V + LG GI+   ++      + T  Y +   S
Sbjct: 230 NVAPQSVDFVKVLPYLCILFLAVAGLNVFVVLGIGILLAGLV-----GMFTTDYSWVSFS 284

Query: 65  GLFWAEGAANSDNINMLLFMLLLGGLISLMTASGATRAFAVWAE------RKCKDRRSAK 118
              +A G  N   I   +  +L+GGL +LM   G     + + E       K K   S +
Sbjct: 285 KDIYA-GFGNMQEI--FILSMLVGGLAALMQQQGGLAFVSRFIEGLIARFSKAKGEASCR 341

Query: 119 A----LTGL--MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVIT 172
           A    + G+  +  A   ++    +  G I R +  +  +S  + A +LD  +   C++ 
Sbjct: 342 AAELGMAGIVSLTNACVANNTVSIVISGDIARDLAQKHGVSAKRSASVLDIFS---CIVQ 398

Query: 173 PISSWGAYIIALIGGILAAHEMTEISAISAFVQMIPMNLYAVFTLLMVLAVIFL 226
            +  +GA  + LIG   A   +T + A+S          YA + +++ L  + +
Sbjct: 399 GLIPYGAQAL-LIGATFA---ITPLEAVS----------YAWYCMILALVAVLI 438