Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (513), Expect = 3e-56
 Identities = 150/492 (30%), Positives = 245/492 (49%), Gaps = 54/492 (10%)

Query: 15  SVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKISGLFWAEGAAN 74
           S+IPP + + LAI  RR +L+L  G VAG ++L+  S L        K+           
Sbjct: 8   SLIPPFVVLALAIWLRRPILALIIGAVAGLLLLDPSSVLGNFADASLKVM---------Q 58

Query: 75  SDNINMLLFML-LLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGLMVFAFFIDDF 133
            + I  L+ +    G LI+L+  +G   AF   A    K R+S+  +T ++    FIDD+
Sbjct: 59  DETIGWLILVCGSFGALIALLVRTGGALAFGRKAILMAKGRKSSLFMTFVLGLVIFIDDY 118

Query: 134 FHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIALIGGILAAHE 193
            ++L+VG   + VTD+F++SR  LAY++DSTAAPVCV+ P+S+W  +     GG+L  + 
Sbjct: 119 LNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVF----FGGLLVDNG 174

Query: 194 M-TEISAISAFVQMIPMNLYAVFTLLMVLAVIF-LPMDIGPMRQHEAWAREGKL------ 245
           +  E  AIS ++  IP  LYA   ++MVL V+  +   IGPM++ E  A +G+       
Sbjct: 175 VAAEGEAISVYMSAIPYMLYAWLAVIMVLLVVVGVVPAIGPMKKAELAAAQGEPAKAQVD 234

Query: 246 WDE-----SKGRPAGLDMEGGETARGTMIDMVLPIAVLTITTLIFMIQTGNAVLAANGEA 300
           W+E          A  D        G + + ++P+ +L   T+ F I     +LA     
Sbjct: 235 WEEVHTSDEYAVKAIEDEFEHADKHGKLHNFLVPLGLLVAFTVYFDIDVWKGLLA----- 289

Query: 301 FSLIGALENTNVAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMPAIIILL 360
                      +A +L Y A+  L           +     +     G  +M+PAI  ++
Sbjct: 290 ----------TLAVTLPYYAVQKL-----------MPMSEMMDQMIDGFKSMLPAIGTVV 328

Query: 361 FAWTIGGVVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLA 420
            A+    V   L    Y+       +  ++LPA+VF+   ++AFATG+SWG F + +P+ 
Sbjct: 329 AAFIFKDVCDQLLLPQYVIDTLSPYMTAKMLPAIVFLAMAVLAFATGSSWGIFAVTIPIV 388

Query: 421 GDIAAASDISLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAIS 480
             +A A      L  + A+L+ + FG  A   S +++L+A G+G + + H VTQLPYA+ 
Sbjct: 389 MPLANAVGADTAL-VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALI 447

Query: 481 AAMGALLGYLAM 492
           AA  A +G++ +
Sbjct: 448 AAALAFVGFILL 459