Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  548 bits (1411), Expect = e-160
 Identities = 278/508 (54%), Positives = 368/508 (72%)

Query: 4   MNLAPYSDSVYSVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKI 63
           M    Y+DS  S++PP++A+LLAI TRRVLLSLG GI+ GA+++  FSPL   QYL  ++
Sbjct: 1   MTTLSYADSALSLLPPVVAILLAIFTRRVLLSLGVGILLGALLIADFSPLDMGQYLGQQV 60

Query: 64  SGLFWAEGAANSDNINMLLFMLLLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGL 123
            GLFW +GA NS N+ +L F++LLG + +L+T SGA +AFA WA +  +++R AK LT  
Sbjct: 61  VGLFWDDGALNSWNVYLLGFLILLGMITALITVSGAAKAFADWARQHIRNKRDAKLLTMF 120

Query: 124 MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIA 183
           +    FIDD+F+SL VG++ RP+TDR+ ISR+KLAYLLDSTAAP+CVI+P+SSWGAYIIA
Sbjct: 121 LGCVVFIDDYFNSLVVGSVARPLTDRYYISRSKLAYLLDSTAAPICVISPVSSWGAYIIA 180

Query: 184 LIGGILAAHEMTEISAISAFVQMIPMNLYAVFTLLMVLAVIFLPMDIGPMRQHEAWAREG 243
           LIGGIL AH  T+   +S F+QMIPMN YA+F L+++L V F+ +D+GPMRQHE  A++G
Sbjct: 181 LIGGILTAHGFTDSGHLSVFIQMIPMNFYAIFALVLLLCVAFMGLDVGPMRQHELNAQKG 240

Query: 244 KLWDESKGRPAGLDMEGGETARGTMIDMVLPIAVLTITTLIFMIQTGNAVLAANGEAFSL 303
            L+DE+KG P G + +  E   G ++ + LPI VL   T+ FMI +G   LAA    FS+
Sbjct: 241 NLYDEAKGLPPGANSDLPEADSGKILGLFLPITVLVFATIYFMIGSGADALAAENLPFSV 300

Query: 304 IGALENTNVAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMPAIIILLFAW 363
           IGA E T+VA SL + A+  LA ++VL +   L           G  +M+PAI ILLFAW
Sbjct: 301 IGAFEKTDVASSLFFGAVVGLAATLVLVVSQGLDKALIFKGVIAGARSMLPAIYILLFAW 360

Query: 364 TIGGVVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDI 423
           TI GV+  ++TG Y+ASL  GN+P  LLPA++FVL+ L AF+TGTSWGTFGIMLP+A D+
Sbjct: 361 TIAGVIGQMETGKYMASLATGNIPFALLPAVLFVLAGLTAFSTGTSWGTFGIMLPIAADM 420

Query: 424 AAASDISLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAM 483
           A  +  ++MLP L++VLAGAVFGDH SPIS T+ILS+TGA  HHIDHV+TQLPYA+  A 
Sbjct: 421 AMGTHTNMMLPMLASVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVLTQLPYALIVAG 480

Query: 484 GALLGYLAMGLLHSVWAGLAASSVWFVL 511
            +L+GY  +G   SV AGLAA S  FV+
Sbjct: 481 ISLVGYTVLGFTESVGAGLAACSALFVV 508