Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (476), Expect = 6e-52
 Identities = 143/498 (28%), Positives = 242/498 (48%), Gaps = 66/498 (13%)

Query: 15  SVIPPLLAVLLAITTRRVLLSLGAGIVAGAVM------LNHFSPLSTVQYLFGKISGLFW 68
           S+IPP++ ++LA+  RR +LSL  G + G V+      LN+FS +S        I  L  
Sbjct: 8   SLIPPVVVLVLAVWLRRPILSLIIGALVGLVLYQPDQVLNNFSDISLSVMADETIGWLIL 67

Query: 69  AEGAANSDNINMLLFMLLLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGLMVFAF 128
             G                G LI+L+  +G + AF   A +  K  +S+  +T ++    
Sbjct: 68  VCGG--------------FGALIALLVKTGGSMAFGRHALKYAKGPKSSLLMTFILGVVI 113

Query: 129 FIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIALIGGI 188
           FIDD+ ++L+VG+  + VTD+F++SR  LAY++DSTAAP+CV+ P+S+W  +     GG+
Sbjct: 114 FIDDYLNALTVGSTMKSVTDKFKVSREMLAYVVDSTAAPICVLVPLSTWAVF----FGGL 169

Query: 189 LAAHEMT-EISAISAFVQMIPMNLYAVFTLLMVLAVIF-LPMDIGPMRQHEAWAREGK-- 244
           L  + +  E   IS ++  IP  LYA   + MVL VI  +    GPM++ +  A  GK  
Sbjct: 170 LVDNGVAGEGQGISVYMSAIPYMLYAWLAVAMVLLVILGIVPAFGPMKKAQLAAMAGKPA 229

Query: 245 ----------LWDESKGRPAGLDMEGGETARGTMIDMVLPIAVLTITTLIFMIQTGNAVL 294
                       D+   +    + +  +   G + + ++PI +L   T+ F I     ++
Sbjct: 230 KAVDAIDEVQTSDDYSVKAIEEEFKHADNL-GKLHNFMVPIILLVGFTVYFDIDVLKGLI 288

Query: 295 AANGEAFSLIGALENTNVAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMP 354
           A                +A +L Y  +  L           +     +     G  +M+P
Sbjct: 289 A---------------TLAVTLPYYGVQRL-----------MPLSEMMEQMLDGFKSMLP 322

Query: 355 AIIILLFAWTIGGVVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFG 414
           AI  ++ A+    V   L    Y+       +  + LPA+VF+   ++AFATG+SWG F 
Sbjct: 323 AIGTVIAAFVFKDVCDKLMLPQYVIGNLSPFMTSQWLPAVVFLTMSILAFATGSSWGIFA 382

Query: 415 IMLPLAGDIAAASDISLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQ 474
           + +P+   +A A +  + L  + A+L+ + FG  A   S +++L+A G+  + + H VTQ
Sbjct: 383 VSIPIVMPLAQAVNADIPL-VIGALLSASSFGSQACFYSDSTVLAAQGSDCNLVSHAVTQ 441

Query: 475 LPYAISAAMGALLGYLAM 492
           LPYA+ AA    +G+L +
Sbjct: 442 LPYALLAAGLTFIGFLIL 459