Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 47/242 (19%)

Query: 267 TMIDMVLPIAVLTITTLIFMIQTGNAVLAANGEAFSLIGALENTNVAQSLVYAALCSLAV 326
           T++D ++PI  L              +L A+   FS   +     +A  L+ AA  +L +
Sbjct: 27  TLLDALIPIIALV------------CMLTASVYLFSSDSSYGANQIA--LIMAACITLVI 72

Query: 327 SIVLSLRLKLSAQTWLSTAPKGVMAMMPAIIILLFAWTIGGVVRDLQTGIYLASLTQGNL 386
            +        +  +W       V ++  A   LL  +++G ++     G ++ +   G +
Sbjct: 73  GVK-------NGYSWKEMEAGIVKSVSLATGALLILFSVGSLI-----GTWILA---GTV 117

Query: 387 PVELL-------PALVFVLSCLM----AFATGTSW---GTFGIMLPLAGDIAAASDISLM 432
           P  +        P   +  SCL+    A + G+SW   GT GI L     +A A  +S+ 
Sbjct: 118 PTMIFYGMKILNPDYFYAASCLLCAVVALSIGSSWTVAGTLGIALI---GVAGAMGLSVE 174

Query: 433 LPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAMGALLGYLAM 492
           + T  A+++GA FGD  SP+S T+ L+   AGS    H+   +     + + AL+G+L +
Sbjct: 175 I-TAGAIISGAYFGDKMSPMSDTTNLAPAVAGSELFGHIRHMVWTTTPSILLALIGFLFI 233

Query: 493 GL 494
           GL
Sbjct: 234 GL 235