Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Na+/H+ antiporter NhaC (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 58.2 bits (139), Expect = 7e-13
 Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 35/237 (14%)

Query: 274 PIAVLTITT-LIFMIQTGNAVLAANGE-AFSLIGALENTNVAQSLVYAALCSLAVSIVLS 331
           P+A+L +   L+  I  G A+ AA  E AF  +          S   A L ++A+++VL 
Sbjct: 18  PVALLPLFLFLVLFIGAGLALGAAGTEMAFYQL----------SPTVAILPAIALALVLR 67

Query: 332 LRLKLSA----------QTWLSTAPKGVMAMMPAIIILL-----FAWTIGGVVRDLQTGI 376
            + + +A            +LS A +  +  M  I +L       A  IGGV   +  G+
Sbjct: 68  EKDQATAARSGGLTRRVNVFLSGAGEINIVTMCVIYLLAGGFASVASAIGGVESTVNLGL 127

Query: 377 YLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDIAAASDISLMLPTL 436
            L       +P  L+   +FV+S  +A A GTS GT   + P+A  +AA + +   L  +
Sbjct: 128 SL-------VPQRLVLPGLFVISAFVATAMGTSMGTIAAVGPIAAGVAAQTGMDAAL-LM 179

Query: 437 SAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAMGALLGYLAMG 493
            AV+ GA+FGD+ S IS T+I +    G    D        A+ AA+ A+  +   G
Sbjct: 180 GAVVGGAMFGDNLSMISDTTIAATRTQGCDMRDKFRMNFAIALPAALLAVTVFWLAG 236



 Score = 38.5 bits (88), Expect = 6e-07
 Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 30/208 (14%)

Query: 7   APYSDSVYSVIPPLLAVLLAITTRRVLLSLGAGIV----AGAVMLNHFSPLSTVQYLFGK 62
           AP    V++V+P +  + +A+    V + L AGI      G  +++ ++PL   Q ++  
Sbjct: 243 APGDYRVFTVLPYVAILAMALLGMNVFVVLFAGIALAGGVGMAVVDGYTPLKFAQDIYKG 302

Query: 63  ISGLFWAEGAANSDNINMLLFMLLLGGLISLMTASG-------ATRAFAVW-AERKCKDR 114
            +G+             +L+  +L+GGL  L+   G       A R F  W  ER     
Sbjct: 303 FTGMH-----------EILVLSMLMGGLGELIRYQGGVAWLLAAVRRFIDWPGERGGAAA 351

Query: 115 RSAKA-LTGLMVFAFF--IDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVI 171
           R+ +A ++GL+  A     ++    +  G + R +     +   + A LLD  +   CV+
Sbjct: 352 RTGEAGISGLVAVADLCTANNTVAIILTGGMAREIAATSGVDPRRSASLLDIFS---CVV 408

Query: 172 TPISSWGAYIIALIGGILAAHEMTEISA 199
             ++   A ++ L G I     +  +SA
Sbjct: 409 QGLAPHAAQVL-LAGSIAGISPVAVLSA 435