Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

 Score =  350 bits (899), Expect = e-101
 Identities = 201/516 (38%), Positives = 314/516 (60%), Gaps = 20/516 (3%)

Query: 13  VYSVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFG---------KI 63
           + S++PP++A+ LA+ T+RV +SL  GI+AG+++ N+++ +++  ++            I
Sbjct: 5   ILSLLPPVVAIGLALITKRVYMSLFLGILAGSLLYNNWNIVASASHIVNTIIGSVELTSI 64

Query: 64  SGLFWAEGAANSDNINMLLFMLLLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGL 123
           +G+    G  N  N+ +LLF+++LG LI+L+T +G   A+  WA  K K +  A   T L
Sbjct: 65  TGISSFTGVGNLWNLLILLFLVMLGILIALITRAGGALAYGNWASTKIKSKEGASLSTSL 124

Query: 124 MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIA 183
           +    FIDD+F+ L+VG + +P+TD+F+ISRAKLAY++DSTAAPVC++ P+SSW A ++ 
Sbjct: 125 LGILLFIDDYFNCLTVGTVMKPITDKFKISRAKLAYIIDSTAAPVCILMPVSSWFAAVVG 184

Query: 184 LIG-GILAAHEMTEISAISAFVQMIPMNLYAVFTLLMVLAVI-FLPMDIGPMRQHEAWAR 241
            +G   +    ++ +S    F   I  N YA+  L MV  +I F  MD GPM+ HE  A 
Sbjct: 185 NLGESGVGTGALSSMSPSGVFFSAILYNTYALVALFMVSFIISFKKMDFGPMKVHEKVAT 244

Query: 242 EGKLWDESKGRPAGLDMEGGETARGTMIDMVLPIAVLTITTLIFMIQTGNAVLAANGEAF 301
           E           A ++ E    + G +  +VLP+ VL I  +IF       + A  G   
Sbjct: 245 ETGDLFNGDAETAAIESEIEPLSGGKISYLVLPLVVL-ILAIIFAFMISGGLFAGVG--- 300

Query: 302 SLIGALENTNVAQSLVYAALCSLAVSIVLSLRLK-LSAQTWLSTAPKGVMAMMPAIIILL 360
            +I +  + + +  L +  L +L  +++  +  K + A+   +   KG   M+PAI IL+
Sbjct: 301 -IIESFLSMDASWGLFWGGLVTLLFTVIYFIVSKAVPAKDIANLFAKGSKLMLPAITILI 359

Query: 361 FAWTIGGVVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLA 420
            AW++G V+ DL TG YL+SL Q +LPV++LPA++F+LS  MAF+TGTSWGTFGIMLP+A
Sbjct: 360 LAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFLLSGFMAFSTGTSWGTFGIMLPIA 419

Query: 421 GDIAAASDI-SLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAI 479
             +A    +   ++P ++AVL GA++GDH+SPIS T+I+S+TGAG+ HIDHV TQLPY  
Sbjct: 420 VPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISDTTIMSSTGAGTKHIDHVQTQLPYTT 479

Query: 480 SAAMGALLGYLAMGLLHSVWAGLAASSVWFVLFCAF 515
              + A LGYL +G  +++  G   S +  + F AF
Sbjct: 480 LIGIMAFLGYLIVG--YTINLGYWVSGLINLAFVAF 513