Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., hypothetical Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  751 bits (1939), Expect = 0.0
 Identities = 376/521 (72%), Positives = 438/521 (84%)

Query: 4   MNLAPYSDSVYSVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKI 63
           M ++ ++DS +SV+PPLLAV LAI TRRVLLSLG GIVAG+++LN FSP  ++ Y+F  +
Sbjct: 1   MEISHFADSGWSVLPPLLAVALAIITRRVLLSLGVGIVAGSLLLNQFSPFDSLHYMFNTV 60

Query: 64  SGLFWAEGAANSDNINMLLFMLLLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGL 123
             +FW +GA N DNINMLLFMLLLGGLISLM+ SGATRAFA WA ++ K RR AK LTG+
Sbjct: 61  LRIFWVDGALNRDNINMLLFMLLLGGLISLMSVSGATRAFAEWAAKRAKTRRGAKGLTGI 120

Query: 124 MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIA 183
           MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCV+ PISSWGAYIIA
Sbjct: 121 MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVLMPISSWGAYIIA 180

Query: 184 LIGGILAAHEMTEISAISAFVQMIPMNLYAVFTLLMVLAVIFLPMDIGPMRQHEAWAREG 243
           L+GGI+AAH +T+ S ISAFV+MIPMNLYAVFTLLMVL VI   +DIG MR HE  A +G
Sbjct: 181 LVGGIMAAHGITDQSPISAFVEMIPMNLYAVFTLLMVLVVIAFQLDIGSMRWHEERALQG 240

Query: 244 KLWDESKGRPAGLDMEGGETARGTMIDMVLPIAVLTITTLIFMIQTGNAVLAANGEAFSL 303
           KLWDESKGRP GLDME  E + G MIDMVLPI  LT  T+ FMI +G AVL+A G  FS+
Sbjct: 241 KLWDESKGRPIGLDMESPEDSNGGMIDMVLPIFTLTAATVYFMIDSGAAVLSAQGLPFSV 300

Query: 304 IGALENTNVAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMPAIIILLFAW 363
           +G+ ENTNV  SLVY ALCSL VSI L+LRLKL A+ W+  AP+GVMAM+PAI ILLFAW
Sbjct: 301 LGSFENTNVGSSLVYGALCSLGVSIALALRLKLGAKNWIKAAPQGVMAMLPAINILLFAW 360

Query: 364 TIGGVVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDI 423
            IG VVRD++TG YLASL  GNLP+E+LPA+VFVLSC MAFATGTSWGTFGIMLPLAGD+
Sbjct: 361 AIGAVVRDVETGKYLASLANGNLPIEVLPAVVFVLSCAMAFATGTSWGTFGIMLPLAGDM 420

Query: 424 AAASDISLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAM 483
           AAASDISLMLP L+AVLAG+VFGDH+SPISSTSILSATGAG HHIDHV+TQLPYA++ A 
Sbjct: 421 AAASDISLMLPMLAAVLAGSVFGDHSSPISSTSILSATGAGCHHIDHVMTQLPYALAMAF 480

Query: 484 GALLGYLAMGLLHSVWAGLAASSVWFVLFCAFNLRQKRWQQ 524
           GA LGYLAMG +HS  AG+  S++WF+LF A++L++ + +Q
Sbjct: 481 GAALGYLAMGFMHSTLAGVCVSALWFILFSAYHLQKAKTRQ 521