Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Na+/H+ antiporter NhaC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 51.2 bits (121), Expect = 8e-11
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 396 FVLSCLMAFATGTSWGTFGIM-LPLAGDIAAASDISLMLPTLSAVLAGAVFGDHASPISS 454
           FVL  + + ATGTS+GT G + + L G   A    + M  T+ AV++GA  GD  SP S 
Sbjct: 120 FVLCGVASIATGTSFGTMGTLGVALLGVGEALGFPAAM--TVGAVVSGAYLGDKMSPASD 177

Query: 455 TSILSATGAGSHHIDHVVTQLPYAISAAMGALLGYLAMGLLH 496
           ++ ++A+       DH+ + +   + AA+ A + Y  +G+LH
Sbjct: 178 STNIAASVCEVDLFDHIGSMMWTTVPAALVAGVVYSVLGVLH 219



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 56/257 (21%), Positives = 93/257 (36%), Gaps = 46/257 (17%)

Query: 9   YSDSVYSVIPPLLAVLLAITTRRVLLSLGAGIVAGA-VMLNHFSPLSTVQYLFGKISGLF 67
           +S S+  VIPPL+ ++LA     V+  + A +++ A + L     L  V         + 
Sbjct: 241 HSLSLVGVIPPLVMLVLAYMRLPVVPVMAACVLSAAGIALFEGHALRDV--------AVS 292

Query: 68  WAEGAANSDNINMLLFMLLLGGLISLM---------TASGA----TRAFAVWAERKCKDR 114
              G  ++  +  L  +L  GG++S+M          A G     +R   V  E   +  
Sbjct: 293 MTTGFKSATGVKQLDMLLSRGGMMSVMPTVLLLSAGVAFGGVLERSRTLEVLIEAVLRGA 352

Query: 115 RSAKALTGLMVFAFFI---DDFFHSLSVGAICRPVTDRFQISRAKLAYL---LDSTAAPV 168
           RS   L G  + A +I         L+     R   D F+     L  L    +      
Sbjct: 353 RSTVRLVGSSLLACYIILLGTGSQLLAAIIPARAFADAFRAQDIHLKVLSRTCEDGGTIG 412

Query: 169 CVITPISSWGAYIIALIGGILAAHEMTEISAISAFVQMIPMNLYAVFT-LLMVLAVIFLP 227
           C + P S    YI+ ++G                 V  +    YAV   ++ V +++   
Sbjct: 413 CPLVPWSVHAFYILGVLG-----------------VSALDFGPYAVLNWIVPVFSMLCAA 455

Query: 228 MDIGPMRQHEAWAREGK 244
             IG  R      R+GK
Sbjct: 456 SGIGVWRADGTGVRQGK 472