Pairwise Alignments

Query, 529 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella sp. ANA-3

 Score =  292 bits (747), Expect = 2e-83
 Identities = 184/503 (36%), Positives = 282/503 (56%), Gaps = 29/503 (5%)

Query: 10  SDSVYSVIPPLLAVLLAITTRRVLLSLGAGIVAGAVMLNHFSPLSTVQYLFGKISGLFWA 69
           S ++ +++P LL ++LA+  RR L++LG GI++GA+++  F  L ++ YL    +  F++
Sbjct: 2   SPNLLAILPLLLTLVLALWLRRTLVALGVGILSGALIIAQFDILQSLGYLLEIGAKQFYS 61

Query: 70  EGAANSDNINMLLFMLLLGGLISLMTASGATRAFAVWAERKCKDRRSAKALTGLMVFAFF 129
           + A    ++N+L+ MLLLG +  L+  SGA   F  W  R+ +  R A+    L+ +  F
Sbjct: 62  QDAWQWWHLNVLMAMLLLGSMTQLLARSGAVEQFGDWLYRRIRTGRQARIGVVLLGWLVF 121

Query: 130 IDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVITPISSWGAYIIALIGGIL 189
           ID  F  L+VG +C+P++ R+ I + +LAYL+DS A+P+C + P SSWG Y++AL+ G+ 
Sbjct: 122 IDGIFSCLAVGHVCQPLSQRYGIRQTQLAYLVDSNASPLCSLLPFSSWGPYVMALLAGL- 180

Query: 190 AAHEMTEISAISAFVQMIPMNLYAVFTLLMVLAVIFLPMDIGPMRQHEAWAR--EGKLWD 247
                  +SA+ AF+ +   N YA+ TL + L V +  M    + +    A   E  L  
Sbjct: 181 ---SFLPVSALEAFIDVALSNFYAITTLGLSLIVAWFGMGFSSIEKALLAAEPVEPSL-S 236

Query: 248 ESKGRPAGLDMEGGETARGTMIDMVLPIAVLTITTLIFMIQTGNAVLAANGEAFSLIGAL 307
            SKG P  L                +P+  L   ++   + +G    A    ++ +   L
Sbjct: 237 SSKGNPWLL---------------AIPMLTLLGASVGLTLWSG----AQQVPSWDISAWL 277

Query: 308 ENTNVAQSLVYAALCSLAVSIVLSLRLKLSAQTWLSTAPKGVMAMMPAIIILLFAWTIGG 367
              ++  ++  A L S  V++VL +    S    L     GV  +  AI ILL  W IG 
Sbjct: 278 AKADIGAAMRDACLLSTLVTLVLLMLSGRSIGKLLGDLAHGVRMIAFAIAILLCTWMIGA 337

Query: 368 VVRDLQTGIYLASLTQGNLPVELLPALVFVLSCLMAFATGTSWGTFGIMLPLAGDIAAAS 427
           V++DL     LAS  +  L   LL A +F+L  +MAFATG+SWGTF IMLP+ G+IA   
Sbjct: 338 VIQDLGVASLLASWAKLYLSPSLLVAGMFLLCAIMAFATGSSWGTFAIMLPIGGEIAHNM 397

Query: 428 DISLMLPTLSAVLAGAVFGDHASPISSTSILSATGAGSHHIDHVVTQLPYAISAAMGALL 487
           D SL+LP LSAV+AG+VFGDH SPIS TS+LSAT +G    DHVVTQLP+A+  A  AL+
Sbjct: 398 DASLLLPVLSAVMAGSVFGDHCSPISDTSVLSATSSGCLPHDHVVTQLPFALIGAGAALV 457

Query: 488 GYLAMGLLHS---VWAGLAASSV 507
           G+  + L  +   VW G+  +++
Sbjct: 458 GFQLVNLSVATLFVWCGVIGTAL 480