Pairwise Alignments

Query, 349 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  225 bits (574), Expect = 1e-63
 Identities = 121/316 (38%), Positives = 182/316 (57%), Gaps = 7/316 (2%)

Query: 27  RWWMVIVWLLSGQAWAANVLVIQSYHSGYAWDAAYTKGLKEGINAQHQLHFFEMDTKRIP 86
           R+ ++   LL   A+AA V +I+SYH+GYAWD  Y  G+ E + A HQL  F++DTKRIP
Sbjct: 3   RFIILFCCLLLSPAFAARVAIIESYHAGYAWDQEYVTGI-EDVLAGHQLTRFQLDTKRIP 61

Query: 87  AREYSVAADRAFQAYQQLKPDLVVLGDDNALYYLLPKLYNEPISIVFLGINSNPREL-LD 145
             +Y  AADR +   +  +P+L+++GDDNA   L  +L    + +VFLG+N  PR+  L+
Sbjct: 62  REDYETAADRVWNELKAYEPELILIGDDNAFRLLSARLSKLKVPLVFLGLNGTPRDYELE 121

Query: 146 EYSGIAQVTGILEQPLFVKNMAEIGRLLPKEKRRVLVLFDSGNTSKIALDYMQDQHKLIK 205
           ++S I   TG+ E+PL  +++  +  LL K+  R+LVLFD+  TS ++  ++      +K
Sbjct: 122 QFSAI---TGVFERPLLKRSVLFMSALLNKDAPRILVLFDASTTSTVSHAHLSQLEPYVK 178

Query: 206 ENLGIEADIRSIKSEQEWKHAVEYANQEGFGAIVVGLYQTLVNIDGLHAAPENIVSWTNE 265
               I  DIR     + W+  V  A  +G+ AI+VGLY TL   DG +  P+ +++W  +
Sbjct: 179 VG-NIHIDIRLDNRSEVWRDRVTQAKAQGYDAIIVGLYHTLFEADGSYTPPDEMLNWIYD 237

Query: 266 HSQLPLFGFWDFSIGKGKAAGGVVLFGLEQGEMAAELVTRILDKQELAKYIPIQINRQGR 325
           H+ +P FGFWDFSIG     GG VL G   G  AA +  RIL+    +   P+ I+  GR
Sbjct: 238 HTSVPSFGFWDFSIGPRGNVGGYVLDGYAHGRTAARMAERILNGTPASSIYPV-IDDSGR 296

Query: 326 GVYQPEEFARWGLTPP 341
            V+      +W L  P
Sbjct: 297 WVFSRSGMQKWQLKVP 312