Pairwise Alignments

Query, 349 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  188 bits (478), Expect = 1e-52
 Identities = 108/315 (34%), Positives = 176/315 (55%), Gaps = 6/315 (1%)

Query: 30  MVIVWLLSGQAWAANVLVIQSYHSGYAWDAAYTKGLKEGINAQHQLHFFEMDTKRIPARE 89
           ++++W  S  A AA ++ I SYH GY W   Y + + E ++   ++    +D+KR+P   
Sbjct: 7   LLLLWT-SLPASAARLMFIHSYHEGYPWVKDYRQAILENLSEPTKMTEIYLDSKRLPRNA 65

Query: 90  YSVAADRAFQAYQQLKPDLVVLGDDNALYYLLPKLYNEPISIVFLGINSNPRELLDEYSG 149
           Y   AD A++A ++ KPD+++L DDNA+  L  ++      +VFLG+N+NPR+      G
Sbjct: 66  YVKRADDAWEAVKRDKPDIIILADDNAISLLSERIATTKTPVVFLGLNTNPRD--HGLQG 123

Query: 150 IAQVTGILEQPLFVKNMAEIGRLLP-KEKRRVLVLFDSGNTSKIALDYMQDQHKLIKENL 208
             Q TGILE+PLF +++  +  LLP KE +++L+L D+  TS+ A   +    K I+   
Sbjct: 124 YRQFTGILERPLFKRSLLLVDCLLPGKETKKLLILSDNSATSRAAFSPISTDFKPIQIG- 182

Query: 209 GIEADIRSIKSEQEWKHAVEYANQEGFGAIVVGLYQTLVNIDGLHAAPENIVSWTNEHSQ 268
            +        S +EW+ AV  A + G+  +  GLY TL    G +  P  +++WT +HS 
Sbjct: 183 KLTIAFTLTNSAKEWQQAVIDAKKAGYQGVFTGLYHTLSKDGGDYMDPSEMIAWTADHSP 242

Query: 269 LPLFGFWDFSIGKGKAAGGVVLFGLEQGEMAAELVTRILDKQELAKYIPIQINRQGRGVY 328
           +P FGFWDF++G+    GG VL G E G + A+L+ R+L   E A  +    + +G   +
Sbjct: 243 VPHFGFWDFTVGRHANPGGYVLNGYEHGLLTAKLINRLL-AGEQASNLGYVSDSKGAFRF 301

Query: 329 QPEEFARWGLTPPKD 343
                A+W L+ PK+
Sbjct: 302 SLSGVAKWHLSIPKE 316