Pairwise Alignments

Query, 349 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1139 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 79.0 bits (193), Expect = 6e-19
 Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 21/298 (7%)

Query: 45  VLVIQSYHSGYAWDAAYTKGLKEGINAQHQLHFFE---MDTKRIPAREYSVAADRAFQ-A 100
           VL + SYH+GY+W      G+++ + A  +   F+   MD+K+   +E      R ++  
Sbjct: 42  VLYLNSYHNGYSWSDDILAGIRKVLEASGRALVFQVEYMDSKKFLYKETEQTLYRLYRDK 101

Query: 101 YQQLKPDLVVLGDDNALYYLLPKLYNE---PISIVFLGINSNPRELLDEYSGIAQVTGIL 157
           ++  + DL++   DNA    L +  +E    + +VF G+N    E L   +    +TG++
Sbjct: 102 FRDTRFDLII-ASDNAAMDFLTRFRDELFPGVPVVFCGLNDVKPESLRGRN----MTGVI 156

Query: 158 EQPLFVKNMAEIGRLLPKEKRRVLVLFDSGNTSKIALDYMQDQHKLIKENLGIEADIRSI 217
           E      N+    R  P + RR++++ D   T     + +  Q   +++ + +E +    
Sbjct: 157 EDYDVAANIELALRFNP-QLRRMVIIGDDSVTGAAIRNQVMAQVAPLRDRIEVE-EWTDY 214

Query: 218 KSEQEWKHAVEYANQEGFGAIVVGLYQTLVNIDGLHAAPENIVSWTNEHSQLPLFGFWDF 277
           + +Q      E      F    V +Y+   +I GL    E ++     +S+ PL+  W+F
Sbjct: 215 RLDQMLAWVREQPADTFF--YFVPIYR---DIGGLFYTAEELLQKVRANSRAPLYSNWEF 269

Query: 278 SIGKGKAAGGVVLFGLEQGEMAAELVTRILDKQELAKYIPIQINRQGRGVYQPEEFAR 335
            +  G   GG ++ G+  GEMAAEL  R+LD  E A  IPI        ++  +E  R
Sbjct: 270 LLDHG-IVGGKLISGVRHGEMAAELALRVLD-GEKADAIPIIERADEEYMFDNKELTR 325