Pairwise Alignments

Query, 349 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 811 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 86/350 (24%), Positives = 160/350 (45%), Gaps = 33/350 (9%)

Query: 9   WHLPPQVVWVLKRGGSHMRWWMVIVWLLSGQAWAA-----NVLVIQSYHSGYAWDAAYTK 63
           W + P  + VL+   S +  W +++  ++  A A      +VL++ SYH G+ W     +
Sbjct: 3   WLVSPFRISVLR---SLVLAWTIMLCFVAAVALAQVQARPHVLLLNSYHQGFRWTDEVVQ 59

Query: 64  GLKEGINAQH--QLHFFEMDTKRIPAREY-SVAADRAFQAYQQLKPDLVVLGDDNALYYL 120
            ++  + +    ++H   MD KRI + +Y    AD   + Y  L+  +V   DD A  ++
Sbjct: 60  AVRGTLASASPVEIHVEYMDAKRIESPDYLDQYADLLRRKYTGLRLSVVAASDDPAFDFV 119

Query: 121 LPK--LYNEPISIVFLGINSNPRELLDEYSGIAQVTGILEQPLFVKNMAEIGRLLPKEKR 178
           L    L+ +   +VF G N    + L   SG+  VT  ++   +   +A   RL P   R
Sbjct: 120 LRHRGLFGDA-PVVFCGTNDITPDRLRGESGVVGVTETVD---YEGGLALALRLHPGV-R 174

Query: 179 RVLVLFDSGNTSKIALDYMQDQHKLIKENLGIEADIRSIKSEQEWKHAVEYANQEGFGAI 238
           ++LV+ D  +T ++  + ++   + +   + +     S          ++ A   G   +
Sbjct: 175 QILVVVDDTSTGRLVRERLEGVRRSLPPGVSLHFSPTSSLGA-----VLDVARTTGADTL 229

Query: 239 VVGLYQTLVNID--GLHAAPENIVSWTNEHSQLPLFGFWDFSIGKGKAAGGVVLFGLEQG 296
           +   + T+ N D  G     + +    +E S+ P++G WDF +G G   GGV+  G  QG
Sbjct: 230 I---FLTIFNRDDAGRFYEYDEVPRLLSEASRSPVYGAWDFYLGDG-IVGGVLTSGEAQG 285

Query: 297 EMAAELVTRILDKQELAKYIPIQINRQGRGVYQPEEFARWGLTP---PKD 343
           + AAELV  +L K+     +P+      + ++   +  R+G+ P   PKD
Sbjct: 286 KTAAELVLEVL-KRGGTTGLPLISRSPNKFMFDYRQLQRFGIRPDRLPKD 334