Pairwise Alignments

Query, 349 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (533), Expect = 6e-59
 Identities = 119/322 (36%), Positives = 183/322 (56%), Gaps = 11/322 (3%)

Query: 27  RWWMVIVWLLSGQA---WAANVLVIQSYHSGYAWDAAYTKGLKEGINAQHQLHFFEMDTK 83
           RW ++++ +L+      +AA V+VI+SYH GY WD  Y + + + +  QHQ+  FEMDTK
Sbjct: 10  RWRLLLLLMLTSHPLMLYAAKVVVIESYHQGYQWDKEYYQAITDKLTPQHQVSHFEMDTK 69

Query: 84  RIPAREYSVAADRAFQAYQQLKPDLVVLGDDNALYYLLPKLYNEPISIVFLGINSNPREL 143
           R+    Y+  A+ A+Q   + +P LV+L DDNA++YL  +L +  I +V+L +N NPRE 
Sbjct: 70  RLAKERYAERAELAWQFIVEQQPQLVILADDNAVHYLHKRLNHGQIPVVYLEVNMNPREY 129

Query: 144 -LDEYSGIAQVTGILEQPLFVKNMAEIGRLLPKEK-RRVLVLFDSGNTSKIALDYMQDQH 201
            L+E+    + TG+LE+PL  +++  + RLLP+ K R++LVLFD  NTSKIA +Y+  Q 
Sbjct: 130 HLNEH---RRFTGVLERPLLKRSLLLLERLLPQAKHRKILVLFDGSNTSKIAAEYISKQP 186

Query: 202 KLIKENLGIEADIRSIKSEQEWKHAVEYANQEGFGAIVVGLYQTLVNIDGLHAAPENIVS 261
             +  +  IE  I  +    EW+  V  A   G+ AIVV LY  + +        +N++ 
Sbjct: 187 SSMLSD--IEVHILQLAQLAEWQQQVRAAKDNGYSAIVVALYHAVRDEHDQSVDADNLLE 244

Query: 262 WTNEHSQLPLFGFWDFSIGKGKAAGGVVLFGLEQGEMAAELVTRILDKQELAKYIPIQIN 321
           W   H+ +P FGFW FSI      GG VL G   G +AA++  RIL  ++     PI  +
Sbjct: 245 WIANHTPVPNFGFWGFSIYANGNLGGYVLDGYHHGSIAADMALRILTGEKPENIFPI-TD 303

Query: 322 RQGRGVYQPEEFARWGLTPPKD 343
             G+  +      +W L  PK+
Sbjct: 304 ALGQYRFSRAAIKKWQLKLPKE 325