Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (307), Expect = 4e-32
 Identities = 93/328 (28%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 312 NCEVELTLSDGTQAYLLFQGIARYADEQFLGFRGTAINITSLKLAQLS-LEIMNQDLEQQ 370
           N E++   S+    +LL      Y D+Q    R   + + + + + ++ +  + Q  + Q
Sbjct: 319 NRELQRLWSNDNNVHLLISEDFHYIDDQAFDLRPAVLQVLNEQKSLIADMMYLEQYWQLQ 378

Query: 371 VANRTQDLALSLTRLQETQTQLI----ESEKLAALGGLVAGVAHEVNTPLGIAVTATSVI 426
           +     D  + L      Q +L     E+ +LA+LG L AG+AHE+N P G+ + A S+ 
Sbjct: 379 IHPIANDQVVVLLEESTEQHKLRQANEEASRLASLGELSAGIAHEINNPTGLILHAISLF 438

Query: 427 QETRESLLNAFN--QQTLTSQQFAEL-----MERMTQSTLMLETNLNRAARLVRDFKQTA 479
               + L  A N  QQ     Q A L     ME M  S+  +E    R +R+V D K+ A
Sbjct: 439 SAAIKDLNPAANYYQQQNPFWQIAGLAPSQAMEEMAVSSDTIEEAAKRISRIVNDLKRYA 498

Query: 480 VDQVSESRSQFHVKQVLDALMASLHSETRKIPVTPQLHGEDSVMMNSLPGVLTQIMTNLV 539
           +  +++  +   + +V++  +    ++T+   VT  LH     +M      L Q++ NL+
Sbjct: 499 LPNLTQDHTLVCLNEVVEVALRLTANQTKTRQVTKLLHLPSPRIMGDAQQ-LHQVLINLI 557

Query: 540 MNSVNHAFAETAQPEIDIHFYQKDQQIMIEYRDNGCGVAKELHQKIFEPFFTTKRGQGGS 599
            N+ +   A     +I     Q   + +I+  DNGCG+     ++I EPFFTT+R +GGS
Sbjct: 558 QNACHACAAHEGSIQISTQVSQG--RALIKVNDNGCGMDSATLKRITEPFFTTRRTEGGS 615

Query: 600 GLGLNLVFNLVKQKLHGQLAFSSEPGHG 627
           GLGL++   ++K+   GQ+   S PG G
Sbjct: 616 GLGLSVCSRIIKEH-QGQMQIHSAPGKG 642